Pre_GI Gene

Some Help

Host: NC_012125 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012125:1693774 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
169377416951681395UDP-glucose lipid carrier transferaseQuickGO ontologyBLASTP
169521616967481533colanic acid exporterQuickGO ontologyBLASTP
169677016980501281pyruvyl transferaseQuickGO ontologyBLASTP
169804716992671221glycosyl transferaseQuickGO ontologyBLASTP
169927817006811404colanic acid biosynthesis proteinQuickGO ontologyBLASTP
170073017017521023UTP-glucose-1-phosphate uridylyltransferaseQuickGO ontologyBLASTP
170213717032161080O-antigen polymeraseQuickGO ontologyBLASTP
170321617042171002hypothetical proteinBLASTP
170420117052081008hypothetical proteinBLASTP
170516217063941233hypothetical proteinBLASTP
170639117078091419phosphomannomutase in colanic acid gene clusterQuickGO ontologyBLASTP
170782417091941371phosphomannomutaseQuickGO ontologyBLASTP
170948017110061527hypothetical proteinBLASTP
1711143171254914076-phosphogluconate dehydrogenaseQuickGO ontologyBLASTP
171278617139521167UDP-glucose 6-dehydrogenaseQuickGO ontologyBLASTP
17141011715078978polysaccharide chain length regulatorQuickGO ontologyBLASTP
17151591715770612bifunctional phosphoribosyl-AMP cyclohydrolasephosphoribosyl-ATP pyrophosphatase proteinQuickGO ontologyBLASTP
17157641716540777imidazole glycerol phosphate synthase subunit HisFQuickGO ontologyBLASTP
171652217172597381-5-phosphoribosyl-5-5- phosphoribosylaminomethylideneamino imidazole-4-carboxamide isomeraseQuickGO ontologyBLASTP
17172591717849591imidazole glycerol phosphate synthase subunit HisHQuickGO ontologyBLASTP
171784917189161068imidazole glycerol-phosphate dehydratasehistidinol phosphataseQuickGO ontologyBLASTP
171891317199921080histidinol-phosphate aminotransferaseQuickGO ontologyBLASTP
171998917212931305histidinol dehydrogenaseQuickGO ontologyBLASTP