Pre_GI: BLASTP Hits

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Query: NC_012125:1693774:1702137 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 1702137, End: 1703216, Length: 1080

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006905:2175361:2189997218999721910761080Salmonella enterica subsp. enterica serovar Choleraesuis strO-antigen polymerase1e-165582
NC_007517:1468719:1487369148736914884871119Geobacter metallireducens GS-15, complete genomehypothetical protein2e-1273.6
NC_013410:3280039:3314005331400533150811077Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein5e-1168.9