Pre_GI Gene

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Host: NC_012125 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012125:1330066 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
132884613300691224phosphoglycerate transport regulatory protein PgtCQuickGO ontologyBLASTP
133006613320722007phosphoglycerate transport system sensor protein PgtBQuickGO ontologyBLASTP
133206213333091248phosphoglycerate transport system transcriptional regulator PgtAQuickGO ontologyBLASTP
13335771334515939outer membrane proteaseQuickGO ontologyBLASTP
13350771335445369EaC proteinQuickGO ontologyBLASTP
13371071337901795EaDQuickGO ontologyBLASTP
13378981338299402hypothetical proteinBLASTP
13382961338529234hypothetical proteinBLASTP
13386751339076402gp43QuickGO ontologyBLASTP
13396431339759117hypothetical protein
13399511340076126hypothetical proteinBLASTP
13402621340810549EndodeoxyribonucleaseQuickGO ontologyBLASTP
13410731341300228ssDNA-binding protein controls activity of RecBCD nucleaseQuickGO ontologyBLASTP
13413251342032708hypothetical proteinBLASTP
13421621342383222bacteriophage ST104 protein KilQuickGO ontologyBLASTP
13423311342504174C3-like proteinQuickGO ontologyBLASTP
13425741342801228bacteriophage ST64T protein 17QuickGO ontologyBLASTP
13430401343240201hypothetical proteinBLASTP
13440271344365339bacteriophage ST64T protein 24QuickGO ontologyBLASTP
13448991345015117hypothetical proteinBLASTP
13454641345679216regulatory protein cro AntirepressorQuickGO ontologyBLASTP
13458811346078198hypothetical proteinBLASTP
13461001346243144hypothetical protein
134704913489291881hypothetical proteinBLASTP
13490801349208129gp62QuickGO ontologyBLASTP
13492261349366141hypothetical proteinBLASTP
13505231350651129gp67QuickGO ontologyBLASTP
13509071351302396endodeoxyribonuclease RUSQuickGO ontologyBLASTP
13513291351502174NinHQuickGO ontologyBLASTP
13514831351662180NinZQuickGO ontologyBLASTP
13519861352177192gp23-like proteinQuickGO ontologyBLASTP
1352320135239576tRNA-ThrQuickGO ontology
13526441352961318holin-like proteinQuickGO ontologyBLASTP
13529481353421474lysinQuickGO ontologyBLASTP
13534181353885468gp15QuickGO ontologyBLASTP
13542721354784513hypothetical proteinBLASTP