Pre_GI: BLASTP Hits

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Query: NC_012125:1330066:1341325 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 1341325, End: 1342032, Length: 708

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006905:368942:379873379873380580708Salmonella enterica subsp. enterica serovar Choleraesuis strOrf-235-like protein6e-138489
NC_011601:1039500:104778010477801048487708Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomerecombination protein2e-129461
NC_011601:717072:726497726497727204708Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomerecombination protein3e-129460
NC_011601:2614691:262472926247292625436708Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein3e-129460
NC_011205:609464:623435623435624142708Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853gp492e-126451
NC_010067:2529750:259234825923482593055708Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein7e-125446
NC_016860:364981:373222373222373929708Salmonella enterica subsp. enterica serovar Typhimurium strgp492e-124444
NC_006511:2501500:252131625213162521894579Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein2e-101368
NC_011147:2496808:251685225168522517430579Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein5e-101367
NC_011083:374000:382124382124382741618Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,essential recombination function protein2e-21102
NC_020054:4028444:404693140469314047455525Fibrella aestuarina BUZ 2 drat genomehypothetical protein3e-1995.5
NC_020054:4983691:499801749980174998535519Fibrella aestuarina BUZ 2 drat genomehypothetical protein4e-1891.7
NC_007964:328825:353870353870354598729Nitrobacter hamburgensis X14, complete genomehypothetical protein8e-1580.5
NC_014974:1539950:154389715438971544367471Thermus scotoductus SA-01 chromosome, complete genomeRad52/22 double-strand break repair protein2e-1375.9
NC_014960:2371989:237759423775942378367774Anaerolinea thermophila UNI-1, complete genomehypothetical protein1e-1170.1
NC_011283:4212000:422470842247084225361654Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein2e-0859.3
NC_009972:606393:621672621672622127456Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genomehypothetical protein5e-0651.6