Pre_GI Gene

Some Help

Host: NC_011985 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011985:3380842 Agrobacterium radiobacter K84 chromosome 1, complete genome

Host Lineage: Agrobacterium tumefaciens; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain has been developed for worldwide commercial use to control crown gall. This species is used commercially to control crown gall, a tumorogenic plant disease caused by the ubiquitous soil-borne pathogen Agrobacterium tumefaciens, which affects susceptible woody plants worldwide. The pathogen is responsible for nursery and orchard losses among stone fruit trees, grapes, apples, pears, nut trees, caneberries, clematis, hops, kiwifruit, persimmons, roses and many ornamental annuals, trees and shrubs. Infected plants are usually weakened and unproductive due to their damaged root system.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
338084233821461305hypothetical proteinBLASTP
33821393382372234hypothetical proteinBLASTP
338249833836731176cobalamin synthesis proteinQuickGO ontologyBLASTP
338368733848531167D-alanyl-D-alanine carboxypeptidase proteinQuickGO ontologyBLASTP
338515633863161161hyppurate hydrolase proteinQuickGO ontologyBLASTP
3386437338651074tRNA-ArgQuickGO ontology
33867553387234480hypothetical protein
33872763387596321hypothetical protein
338786433890511188bacteriophage portal proteinQuickGO ontologyBLASTP
33894053389656252hypothetical protein
338965333908221170phage major capsid protein HK97 familyQuickGO ontologyBLASTP
33911353391512378phage related proteinQuickGO ontologyBLASTP
33918783392669792hypothetical protein
339286133939551095hypothetical proteinBLASTP
33939523394359408hypothetical protein
339516633963831218Phage integrase proteinQuickGO ontologyBLASTP
33965893397101513DNA topology modulation kinase FlaR-like proteinQuickGO ontologyBLASTP
33971253397418294hypothetical protein
33976483398241594hypothetical proteinBLASTP
33982763398542267hypothetical protein
3398748339994111941-deoxy-D-xylulose 5-phosphate reductoisomeraseQuickGO ontologyBLASTP
339999334014861494exopolysaccharide inner membrane proteinQuickGO ontologyBLASTP
3401877340310612308-amino-7-oxononanoate synthase proteinQuickGO ontologyBLASTP
34033083404102795xanthine dehydrogenase proteinQuickGO ontologyBLASTP