Pre_GI: BLASTP Hits

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Query: NC_011985:3380842:3403308 Agrobacterium radiobacter K84 chromosome 1, complete genome

Start: 3403308, End: 3404102, Length: 795

Host Lineage: Agrobacterium tumefaciens; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain has been developed for worldwide commercial use to control crown gall. This species is used commercially to control crown gall, a tumorogenic plant disease caused by the ubiquitous soil-borne pathogen Agrobacterium tumefaciens, which affects susceptible woody plants worldwide. The pathogen is responsible for nursery and orchard losses among stone fruit trees, grapes, apples, pears, nut trees, caneberries, clematis, hops, kiwifruit, persimmons, roses and many ornamental annuals, trees and shrubs. Infected plants are usually weakened and unproductive due to their damaged root system.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009445:7220929:724562872456287246428801Bradyrhizobium sp. ORS 278 chromosome, complete genomecarbon monoxide dehydrogenase medium subunit, coxM-like protein2e-64246
NC_014910:2045088:204508820450882045879792Alicycliphilus denitrificans BC chromosome, complete genomecarbon-monoxide dehydrogenase (acceptor)2e-49196
NC_015422:2326942:232694223269422327733792Alicycliphilus denitrificans K601 chromosome, complete genomecarbon-monoxide dehydrogenase2e-49196
NC_018643:320197:329060329060329845786Alpha proteobacterium HIMB5 chromosome, complete genomeFAD-binding protein similar to molybdopterin dehydrogenase3e-48191
NC_008701:1607419:162105616210561621874819Pyrobaculum islandicum DSM 4184, complete genomemolybdopterin dehydrogenase, FAD-binding3e-26118
NC_003106:1786000:180104818010481801899852Sulfolobus tokodaii str. 7, complete genomehypothetical carbon-monoxide dehydrogenase middle subunit2e-24113
NC_002754:2391867:239955223995522400400849Sulfolobus solfataricus P2, complete genomeCarbon monoxide dehydrogenase, medium chain. (cutB-2)2e-24112
NC_012726:2461102:247231724723172473165849Sulfolobus islandicus M.16.4 chromosome, complete genomemolybdopterin dehydrogenase FAD-binding8e-24110
NC_012588:2483000:249192324919232492771849Sulfolobus islandicus M.14.25 chromosome, complete genomemolybdopterin dehydrogenase FAD-binding8e-24110
NC_012632:2564801:257601625760162576864849Sulfolobus islandicus M.16.27 chromosome, complete genomemolybdopterin dehydrogenase FAD-binding8e-24110
NC_017276:2391645:240286024028602403708849Sulfolobus islandicus REY15A chromosome, complete genomemolybdopterin dehydrogenase FAD-binding protein8e-24110
NC_017275:2519637:253085225308522531700849Sulfolobus islandicus HVE10/4 chromosome, complete genomemolybdopterin dehydrogenase FAD-binding protein8e-24110
NC_013769:2591065:260059826005982601446849Sulfolobus islandicus L.D.8.5 chromosome, complete genomemolybdopterin dehydrogenase, FAD-binding protein7e-24110
NC_012589:2605085:261461826146182615466849Sulfolobus islandicus L.S.2.15, complete genomemolybdopterin dehydrogenase FAD-binding7e-24110
NC_012622:2571812:258342925834292584277849Sulfolobus islandicus Y.G.57.14 chromosome, complete genomemolybdopterin dehydrogenase FAD-binding7e-24110
NC_012623:2680601:269013326901332690981849Sulfolobus islandicus Y.N.15.51 chromosome, complete genomemolybdopterin dehydrogenase FAD-binding7e-24110
NC_014831:1763408:177744317774431778345903Thermaerobacter marianensis DSM 12885 chromosome, complete genomemolybdopterin dehydrogenase FAD-binding protein2e-23109
NC_016584:432610:435659435659436525867Desulfosporosinus orientis DSM 765 chromosome, complete genomeaerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein6e-23107
NC_013159:2098500:213999221399922140810819Saccharomonospora viridis DSM 43017, complete genomecarbon monoxide dehydrogenase, medium subunit4e-22105
NC_012622:786554:794890794890795777888Sulfolobus islandicus Y.G.57.14 chromosome, complete genomemolybdopterin dehydrogenase FAD-binding4e-21101
NC_013523:2560000:256865725686572569529873Sphaerobacter thermophilus DSM 20745 chromosome 1, complete genomemolybdopterin dehydrogenase FAD-binding protein1e-20100
NC_010511:637214:657815657815658681867Methylobacterium sp. 4-46 chromosome, complete genomeFAD-binding molybdopterin dehydrogenase3e-2099.4
NC_014098:2332938:235990023599002360712813Bacillus tusciae DSM 2912 chromosome, complete genomemolybdopterin dehydrogenase FAD-binding protein8e-2097.4
NC_003911:2540453:254627825462782547132855Silicibacter pomeroyi DSS-3, complete genomecarbon monoxide dehydrogenase, medium subunit9e-2097.4
NC_009921:5609770:562589956258995626819921Frankia sp. EAN1pec, complete genomemolybdopterin dehydrogenase FAD-binding2e-1996.3
NC_020210:1275031:135067513506751351553879Geobacillus sp. GHH01, complete genomemolybdopterin dehydrogenase FAD-binding protein4e-1995.5
NC_010718:2265447:227800722780072278885879Natranaerobius thermophilus JW/NM-WN-LF, complete genomemolybdopterin dehydrogenase FAD-binding6e-1994.7
NC_015422:4508028:452353745235374524415879Alicycliphilus denitrificans K601 chromosome, complete genomecarbon-monoxide dehydrogenase7e-1891.3
NC_008148:1859888:189554318955431896406864Rubrobacter xylanophilus DSM 9941, complete genomemolybdopterin dehydrogenase, FAD-binding protein6e-1787.8
NC_016885:1153277:117017511701751171017843Pyrobaculum oguniense TE7 chromosome, complete genomeAerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein1e-1687
NC_002927:383760:402279402279403148870Bordetella bronchiseptica RB50, complete genomemolybdopterin dehydrogenase2e-1686.7
NC_015563:3203012:323374732337473234643897Delftia sp. Cs1-4 chromosome, complete genomecarbon-monoxide dehydrogenase6e-1684.7
NC_014666:3334195:333522433352243336111888Frankia sp. EuI1c chromosome, complete genomemolybdopterin dehydrogenase FAD-binding protein1e-1584
NC_009633:712500:721271721271722125855Alkaliphilus metalliredigens QYMF chromosome, complete genomeFAD-binding molybdopterin dehydrogenase3e-1582.4
NC_015519:426948:448574448574449446873Tepidanaerobacter sp. Re1 chromosome, complete genomecarbon-monoxide dehydrogenase4e-1582
NC_008578:1827605:184005318400531840940888Acidothermus cellulolyticus 11B, complete genomeCarbon-monoxide dehydrogenase (acceptor)6e-1581.3
NC_009454:1577319:160996416099641610833870Pelotomaculum thermopropionicum SI, complete genomeaerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs2e-1479.7
NC_019978:1022209:103837010383701039281912Halobacteroides halobius DSM 5150, complete genomeaerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein3e-1479.3
NC_014654:2311818:231931723193172320192876Halanaerobium sp. 'sapolanicus' chromosome, complete genomemolybdopterin dehydrogenase FAD-binding protein3e-1479
NC_009142:5425763:544756054475605448447888Saccharopolyspora erythraea NRRL 2338, complete genomecarbon monoxide dehydrogenase medium subunit6e-1478.2
NC_014632:113420:115274115274116155882Ilyobacter polytropus DSM 2926 chromosome, complete genomeFAD-binding molybdopterin dehydrogenase protein2e-1376.3
NC_009922:411434:427484427484428371888Alkaliphilus oremlandii OhILAs, complete genomemolybdopterin dehydrogenase FAD-binding1e-1273.9
NC_003364:1463317:1477781147778114791271347Pyrobaculum aerophilum str. IM2, complete genomemolybdopterin binding oxidoreductase small and medium subunit2e-1272.8
NC_009922:944538:958973958973959827855Alkaliphilus oremlandii OhILAs, complete genomemolybdopterin dehydrogenase FAD-binding3e-1272.4
NC_011750:3407500:342990034299003430778879Escherichia coli IAI39 chromosome, complete genomexanthine dehydrogenase subunit XdhB7e-1271.2
NC_014210:2638773:265701926570192657888870Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,molybdopterin dehydrogenase FAD-binding protein1e-1170.1
NC_009801:3175714:320625632062563207134879Escherichia coli E24377A, complete genomexanthine dehydrogenase, FAD-binding subunit6e-1168.2
NC_011751:3285646:332517333251733326051879Escherichia coli UMN026 chromosome, complete genomexanthine dehydrogenase subunit XdhB6e-1168.2
NC_011206:863987:884000884000884866867Acidithiobacillus ferrooxidans ATCC 53993, complete genomemolybdopterin dehydrogenase FAD-binding6e-1168.2
NC_011761:684969:704982704982705848867Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completexanthine dehydrogenase, FAD-binding protein6e-1168.2
AP010958:3474077:351022935102293511107879Escherichia coli O103:H2 str. 12009 DNA, complete genomexanthine dehydrogenase, FAD-binding subunit7e-1167.8
NC_000913:2975659:300063630006363001514879Escherichia coli K12, complete genomexanthine dehydrogenase, FAD-binding subunit7e-1167.8
NC_010473:3069529:309450630945063095384879Escherichia coli str. K-12 substr. DH10B, complete genomexanthine dehydrogenase, FAD-binding subunit7e-1167.8
NC_011748:3196173:322675532267553227633879Escherichia coli 55989, complete genomexanthine dehydrogenase subunit XdhB7e-1167.8
CP002516:903241:905535905535906413879Escherichia coli KO11, complete genomemolybdopterin dehydrogenase FAD-binding protein7e-1167.8
CP002185:3167738:319966331996633200541879Escherichia coli W, complete genomexanthine dehydrogenase, FAD-binding subunit7e-1167.8
AC_000091:2976293:300127030012703002148879Escherichia coli W3110 DNA, complete genomexanthine dehydrogenase, FAD-binding subunit7e-1167.8
CU928145:3196173:322675532267553227633879Escherichia coli 55989 chromosome, complete genomexanthine dehydrogenase, FAD-binding subunit7e-1167.8
CU928160:3030324:306087030608703061748879Escherichia coli IAI1 chromosome, complete genomexanthine dehydrogenase, FAD-binding subunit7e-1167.8
NC_016902:903241:905535905535906413879Escherichia coli KO11FL chromosome, complete genomemolybdopterin dehydrogenase FAD-binding protein7e-1167.8
NC_013364:3552284:358283935828393583717879Escherichia coli O111:H- str. 11128, complete genomexanthine dehydrogenase, FAD-binding subunit7e-1167.8
NC_013353:3474077:351022935102293511107879Escherichia coli O103:H2 str. 12009, complete genomexanthine dehydrogenase, FAD-binding subunit7e-1167.8
NC_012759:2862807:288778428877842888662879Escherichia coli BW2952 chromosome, complete genomexanthine dehydrogenase subunit XdhB7e-1167.8
NC_011741:3030324:306087030608703061748879Escherichia coli IAI1 chromosome, complete genomexanthine dehydrogenase subunit XdhB7e-1167.8
NC_011415:3217796:324834032483403249218879Escherichia coli SE11 chromosome, complete genomexanthine dehydrogenase subunit XdhB7e-1167.8
NC_010468:906957:909251909251910129879Escherichia coli ATCC 8739, complete genomemolybdopterin dehydrogenase FAD-binding7e-1167.8
NC_002655:3769643:380825138082513809129879Escherichia coli O157:H7 EDL933, complete genomeputative dehydrogenase9e-1167.4
NC_013941:3540420:356494935649493565827879Escherichia coli O55:H7 str. CB9615 chromosome, complete genomexanthine dehydrogenase FAD-binding subunit9e-1167.4
NC_013008:3761467:380006838000683800946879Escherichia coli O157:H7 str. TW14359 chromosome, complete genomexanthine dehydrogenase subunit XdhB9e-1167.4
NC_011353:3805819:384534238453423846220879Escherichia coli O157:H7 str. EC4115 chromosome, complete genomexanthine dehydrogenase subunit XdhB9e-1167.4
NC_002695:3702344:374094537409453741823879Escherichia coli O157:H7 str. Sakai, complete genomeputative dehydrogenase9e-1167.4
NC_015559:1478114:1498190149819014996831494Marinomonas posidonica IVIA-Po-181 chromosome, complete genomexanthine dehydrogenase, small subunit3e-1065.9
NC_007384:3151344:317230931723093173187879Shigella sonnei Ss046, complete genomeputative dehydrogenase3e-1065.5
NC_015567:2420169:2418746241874624201761431Serratia sp. AS9 chromosome, complete genomexanthine dehydrogenase, small subunit6e-1064.7
NC_015566:2420287:2418864241886424202941431Serratia sp. AS12 chromosome, complete genomexanthine dehydrogenase, small subunit6e-1064.7
NC_014328:2588994:259900725990072599843837Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeaerobic-type CO dehydrogenase middle subunit7e-1064.7
NC_018515:1354511:136408113640811364923843Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeaerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein8e-1064.3
NC_019978:1022209:103433210343321035210879Halobacteroides halobius DSM 5150, complete genomeaerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein1e-0963.5
NC_014364:2904443:292381429238142924683870Spirochaeta smaragdinae DSM 11293 chromosome, complete genomemolybdopterin dehydrogenase FAD-binding protein2e-0962.8
NC_016751:1740265:174448117444811745347867Marinitoga piezophila KA3 chromosome, complete genomeaerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein9e-0960.8
NC_014654:2311818:231523523152352316152918Halanaerobium sp. 'sapolanicus' chromosome, complete genomemolybdopterin dehydrogenase FAD-binding protein1e-0860.5
NC_012225:47800:635486354864390843Brachyspira hyodysenteriae WA1, complete genomeaerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM s6e-0858.2
NC_002696:2829002:2831334283133428327731440Caulobacter crescentus CB15, complete genome1e-0757
NC_018604:2253539:225780822578082258659852Brachyspira pilosicoli WesB complete genomeCoxM protein1e-0757
NC_019908:2401577:242523224252322426083852Brachyspira pilosicoli P43/6/78 chromosome, complete genomeCoxM protein1e-0757
NC_014328:3294086:329916032991603299993834Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative xanthine dehydrogenase subunit2e-0756.6
NC_014330:768232:795020795020795871852Brachyspira pilosicoli 95/1000 chromosome, complete genomeCoxM protein2e-0756.2
NC_018607:2111581:213834721383472138886540Brachyspira pilosicoli B2904 chromosome, complete genomeCoxM protein4e-0755.5
NC_010338:4015928:4018260401826040197411482Caulobacter sp. K31, complete genomexanthine dehydrogenase, small subunit4e-0755.5
NC_017243:2190000:222868922286892229228540Brachyspira intermedia PWS/A chromosome, complete genomeaerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM s3e-0755.5
NC_018524:2246225:2279242227924222807051464Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeFAD binding domain in molybdopterin dehydrogenase family protein5e-0755.1
NC_014150:2994000:299902029990202999871852Brachyspira murdochii DSM 12563 chromosome, complete genomemolybdopterin dehydrogenase FAD-binding protein8e-0754.3
NC_020829:3434736:3458336345833634597991464Pseudomonas denitrificans ATCC 13867, complete genomemolybdopterin dehydrogenase, FAD-binding protein2e-0653.1
NC_017955:2327500:234863723486372349491855Modestobacter marinus, complete genomeXanthine dehydrogenase FAD-binding subunit2e-0653.1