Pre_GI Gene

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Host: NC_011205 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011205:1345511 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
134551113475622052protease 2QuickGO ontologyBLASTP
13475991348297699exodeoxyribonuclease XQuickGO ontologyBLASTP
13483211348977657carbon-nitrogen family hydrolaseQuickGO ontologyBLASTP
13490851349315231DNA polymerase III subunit thetaQuickGO ontologyBLASTP
13494531349827375hypothetical proteinBLASTP
13498281350703876copper resistance protein DQuickGO ontologyBLASTP
13507201351073354hypothetical proteinBLASTP
135145613525351080phage integraseQuickGO ontologyBLASTP
13528491353085237hypothetical protein
13533761353561186hypothetical proteinBLASTP
13536081354438831recombination and repair protein RecTQuickGO ontologyBLASTP
135443113571212691exonuclease VIIIQuickGO ontologyBLASTP
13572621357597336hypothetical proteinBLASTP
13576731357879207prophage Kil proteinQuickGO ontologyBLASTP
13578831358158276hypothetical proteinBLASTP
13591761359373198regulatorQuickGO ontologyBLASTP
13599141360408495hypothetical proteinBLASTP
13604551361453999hypothetical proteinBLASTP
13614851361907423replication P family proteinQuickGO ontologyBLASTP
136260213636631062diguanylate cyclaseQuickGO ontologyBLASTP
136414113661081968alkylaryl-sulfatase BDS1QuickGO ontologyBLASTP
13662651366390126hypothetical proteinBLASTP
13668271367045219hypothetical proteinBLASTP
13671091367708600hypothetical proteinBLASTP
13677051367932228gifsy-1 prophage NinGQuickGO ontologyBLASTP
13680621368709648gifsy-1 prophage RegQQuickGO ontologyBLASTP
13688061369330525hypothetical proteinBLASTP
13695911369707117hypothetical proteinBLASTP
13705141370987474hypothetical proteinBLASTP
13714701371805336phage holin lambda familyQuickGO ontologyBLASTP
13717921372241450phage lysozymeQuickGO ontologyBLASTP
13722381372738501bacteriophage lysis proteinQuickGO ontologyBLASTP
13729461373479534gifsy-2 prophage proteinQuickGO ontologyBLASTP
137343313755742142phage terminase large subunitQuickGO ontologyBLASTP
13755711375777207hypothetical proteinBLASTP
137577413773211548phage portal protein lambda familyQuickGO ontologyBLASTP
137727213793262055ATP-dependent proteaseQuickGO ontologyBLASTP
13794171379740324RecARadA recombinaseQuickGO ontologyBLASTP
13797331380032300hypothetical proteinBLASTP
13800131380579567prophage minor tail protein ZQuickGO ontologyBLASTP
13805761380977402phage minor tail protein UQuickGO ontologyBLASTP