Pre_GI: BLASTP Hits

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Query: NC_011205:1345511:1354431 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 1354431, End: 1357121, Length: 2691

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016831:1734292:1756528175652817592182691Salmonella enterica subsp. enterica serovar Gallinarum/pullorumExodeoxyribonuclease VIII01768
NC_012759:1296000:1304869130486913074692601Escherichia coli BW2952 chromosome, complete genomeexonuclease VIII0655
NC_010473:1493983:1502206150220615048062601Escherichia coli str. K-12 substr. DH10B, complete genome 3' specific dsDNA exonuclease' target='_blank' title='Search database for similar gene annotations'>Rac prophage; exonuclease VIII, 5' -> 3' specific dsDNA exonuclease0655
AC_000091:1407693:1416500141650014191002601Escherichia coli W3110 DNA, complete genome 3' specific dsDNA exonuclease' target='_blank' title='Search database for similar gene annotations'>exonuclease VIII, 5' -> 3' specific dsDNA exonuclease0655
NC_000913:1404000:1412810141281014154102601Escherichia coli K12, complete genome 3' specific dsDNA exonuclease' target='_blank' title='Search database for similar gene annotations'>Rac prophage; exonuclease VIII, 5' -> 3' specific dsDNA exonuclease0655
NC_011094:1923870:1944300194430019454061107Salmonella enterica subsp. enterica serovar Schwarzengrund strexodeoxyribonuclease 86e-176618
NC_010102:1137247:1150514115051411516201107Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-174612
NC_011415:1472500:1478214147821414808142601Escherichia coli SE11 chromosome, complete genomeexonuclease VIII3e-147523
NC_016902:2580774:2599925259992526025252601Escherichia coli KO11FL chromosome, complete genomeexodeoxyribonuclease VIII5e-147522
CP002185:1493280:1503325150332515059252601Escherichia coli W, complete genomeRac prophage; exonuclease VIII, 5' -3' specific dsDNA exonuclease5e-147522
CP002516:2580774:2599925259992526025252601Escherichia coli KO11, complete genomeexodeoxyribonuclease VIII5e-147522
NC_012967:1403733:1411956141195614145562601Escherichia coli B str. REL606 chromosome, complete genomeexonuclease VIII5e-147522
NC_011080:1944226:197152119715211972468948Salmonella enterica subsp. enterica serovar Newport str. SL254,exodeoxyribonuclease 81e-146521
NC_002655:2142587:2160309216030921629092601Escherichia coli O157:H7 EDL933, complete genomeputative exodeoxyribonuclease VIII of prophage CP-933R2e-146520
NC_011205:1391971:140026314002631401210948Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853exodeoxyribonuclease 87e-144511
NC_016831:1690811:171309117130911713744654Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein1e-98361
NC_016856:1957263:197776019777601978413654Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SRecE-like protein5e-98359
NC_017046:1902788:192328619232861923939654Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage encoded Exodeoxyribonuclease VIII6e-97356
NC_016860:1943203:196189619618961962549654Salmonella enterica subsp. enterica serovar Typhimurium strexonuclease VIII6e-97356
NC_016857:1903426:192392319239231924576654Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74exodeoxyribonuclease VIII6e-97356
NC_016810:1903426:192392319239231924576654Salmonella enterica subsp. enterica serovar Typhimurium str6e-97356
NC_011083:1993672:201537620153762016029654Salmonella enterica subsp. enterica serovar Heidelberg str. SL476, 3' specific dsdna exonuclease' target='_blank' title='Search database for similar gene annotations'>rac prophage; exonuclease VIII, 5' -> 3' specific dsdna exonuclease6e-95349
NC_014306:3524980:357527135752713576089819Erwinia billingiae Eb661, complete genomephage exonuclease VIII6e-82306
NC_009792:1770106:1790893179089317938052913Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-76287
NC_011294:1220526:124705712470571247556500Salmonella enterica subsp. enterica serovar Enteritidis str4e-75283
NC_003198:1908238:1927497192749719306253129Salmonella enterica subsp. enterica serovar Typhi str. CT18,exodeoxyribonuclease VIII4e-68259
NC_011274:1299475:131117213111721311666495Salmonella enterica subsp. enterica serovar Gallinarum str. 287/919e-68259
NC_016863:1905454:192611019261101926604495Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1RecE-like protein2e-66254
NC_003197:1945858:196651419665141967008495Salmonella typhimurium LT2, complete genomeRecE-like protein2e-66254
NC_010102:1829357:1831834183183418347612928Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-66254
NC_011080:2761403:2773287277328727762142928Salmonella enterica subsp. enterica serovar Newport str. SL254,gifsy-1 prophage RecE6e-61236
NC_017046:2756000:2770321277032127732482928Salmonella enterica subsp. enterica serovar Typhimurium str. 798exodeoxyribonuclease viii5e-61236
NC_016856:2812905:2824789282478928277162928Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sexodeoxyribonuclease VIII-like protein4e-61236
NC_013850:2182337:2188707218870721918053099Klebsiella variicola At-22 chromosome, complete genomeexodeoxyribonuclease VIII1e-44182
NC_009648:1541699:1546756154675615498723117Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative entero exodeoxyribonuclease VIII1e-43178
NC_011294:1465500:146968014696801470303624Salmonella enterica subsp. enterica serovar Enteritidis strphage encoded exodeoxyribonuclease1e-40168
NC_016612:3803130:3810509381050938126472139Klebsiella oxytoca KCTC 1686 chromosome, complete genomeexodeoxyribonuclease VIII8e-39162
NC_015663:4522109:4541184454118445441742991Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative entero exodeoxyribonuclease VIII2e-36155
NC_010645:1496816:149983814998381500692855Bordetella avium 197N, complete genomephage protein1e-34149
NC_010645:406794:408221408221409075855Bordetella avium 197N, complete genomephage-related exonuclease1e-34149
NC_009255:1344000:134836513483651349180816Burkholderia vietnamiensis G4 chromosome 2, complete sequenceexonuclease VIII3e-31137
NC_009256:1253384:125676812567681257583816Burkholderia vietnamiensis G4 chromosome 1, complete sequence 3' specific dsDNA exonuclease' target='_blank' title='Search database for similar gene annotations'>exonuclease VIII, 5' -> 3' specific dsDNA exonuclease2e-29132
NC_008258:1873805:188222618822261883152927Shigella flexneri 5 str. 8401, complete genome2e-29131
NC_020181:2097066:2114821211482121172682448Enterobacter aerogenes EA1509E, complete genomeExodeoxyribonuclease VIII2e-29131
NC_014394:993465:996493996493997305813Gallionella capsiferriformans ES-2 chromosome, complete genomehypothetical protein4e-29130
NC_007950:109399:120711120711121706996Polaromonas sp. JS666 plasmid 2, complete sequencehypothetical protein1e-1689.7
NC_008570:2216736:2226502222650222279891488Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehypothetical protein5e-1687
NC_020211:2094500:2095626209562620982682643Serratia marcescens WW4, complete genomeexodeoxyribonuclease7e-1583.6
NC_007948:1574881:158763615876361588583948Polaromonas sp. JS666, complete genomehypothetical protein8e-1376.6
NC_012779:1966205:1966205196620519686852481Edwardsiella ictaluri 93-146, complete genomegifsy-1 prophage RecE4e-1067.8
NC_009801:1419324:1419324141932414217952472Escherichia coli E24377A, complete genomeexonuclease family protein9e-1066.6
NC_009801:1392696:1419324141932414217952472Escherichia coli E24377A, complete genomeexonuclease family protein9e-1066.6
NC_013174:2455420:246447624644762465324849Jonesia denitrificans DSM 20603, complete genomehypothetical protein5e-0860.8
NC_013508:1687432:1711632171163217141062475Edwardsiella tarda EIB202, complete genomeGifsy-1 prophage protein2e-0758.9
NC_012214:1974500:1978496197849619807392244Erwinia pyrifoliae Ep1/96, complete genomeSimilarities with exodeoxyribonuclease VIII4e-0757.8
CP002797:4812799:4828966482896648311822217Escherichia coli NA114, complete genomeHypothetical protein9e-0756.6
NC_011283:3177350:3192012319201231936611650Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein9e-0756.6
NC_016902:2305659:2308505230850523109822478Escherichia coli KO11FL chromosome, complete genomeExonuclease RNase T and DNA polymerase III1e-0656.2
CP002516:2305659:2308505230850523109822478Escherichia coli KO11, complete genomeExonuclease RNase T and DNA polymerase III1e-0656.2
NC_010468:2265423:2265423226542322679002478Escherichia coli ATCC 8739, complete genomeExonuclease RNase T and DNA polymerase III1e-0656.2
NC_011415:2277559:2304543230454323067592217Escherichia coli SE11 chromosome, complete genomehypothetical protein1e-0655.8
NC_009801:2193000:2216941221694122190072067Escherichia coli E24377A, complete genomehypothetical protein2e-0655.1
NC_009801:1756610:1774599177459917770762478Escherichia coli E24377A, complete genomeexonuclease family protein2e-0655.1
NC_011751:1859606:1882358188235818848292472Escherichia coli UMN026 chromosome, complete genomeputative exonuclease from phage origin4e-0654.7