Pre_GI Gene

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Host: NC_011147 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011147:854730 Salmonella enterica subsp. enterica serovar Paratyphi A str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a clinical isolate collected from a child with paratyphoid fever in Karachi, Pakistan, 2004. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
8560078571461140glycosyl transferase family proteinQuickGO ontologyBLASTP
8571578585601404colanic acid biosynthesis proteinQuickGO ontologyBLASTP
8600088610931086dTDP-glucose 46 dehydrataseQuickGO ontologyBLASTP
861093861992900dTDP-4-dehydrorhamnose reductaseQuickGO ontologyBLASTP
862040862918879TDP-glucose pyrophosphorylaseQuickGO ontologyBLASTP
862928863470543dTDP-4-dehydrorhamnose 35-epimeraseQuickGO ontologyBLASTP
863476864450975CDP-6-deoxy-delta-34-glucoseen reductaseQuickGO ontologyBLASTP
864466865239774glucose-1-phosphate cytidylyltransferaseQuickGO ontologyBLASTP
8652448663231080CDP-glucose 46-dehydrataseQuickGO ontologyBLASTP
8663508676631314dehydratase RfbHQuickGO ontologyBLASTP
867699868538840paratose synthaseQuickGO ontologyBLASTP
8696218709191299O-antigen transporterQuickGO ontologyBLASTP
8709218719221002glycosyl transferase family proteinQuickGO ontologyBLASTP
8724978735581062glycosyltransferaseQuickGO ontologyBLASTP
873559874503945rhamnosyltransferaseQuickGO ontologyBLASTP
8745048759431440mannose-1-phosphate guanylyltransferaseQuickGO ontologyBLASTP
8759308773631434phosphomannomutaseQuickGO ontologyBLASTP
8774358788651431undecaprenyl-phosphate galactosephosphotransferaseQuickGO ontologyBLASTP
87902988043514076-phosphogluconate dehydrogenaseQuickGO ontologyBLASTP
8806728818381167UDP-glucose 6-dehydrogenaseQuickGO ontologyBLASTP
881987882964978polysaccharide chain length regulatorQuickGO ontologyBLASTP
883045883656612bifunctional phosphoribosyl-AMP cyclohydrolasephosphoribosyl-ATP pyrophosphataseQuickGO ontologyBLASTP
883650884426777imidazole glycerol phosphate synthase subunit HisFQuickGO ontologyBLASTP
8844088851457381-5-phosphoribosyl-5-5- phosphoribosylaminomethylideneamino imidazole-4-carboxamide isomeraseQuickGO ontologyBLASTP
885145885735591imidazole glycerol phosphate synthase subunit HisHQuickGO ontologyBLASTP
8857358868021068imidazole glycerol-phosphate dehydratasehistidinol phosphataseQuickGO ontologyBLASTP
8867998878781080histidinol-phosphate aminotransferaseQuickGO ontologyBLASTP
8878758891791305histidinol dehydrogenaseQuickGO ontologyBLASTP
889282890181900ATP phosphoribosyltransferaseQuickGO ontologyBLASTP
890540891364825hypothetical proteinBLASTP