Pre_GI Gene

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Host: NC_011004 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011004:4183993 Rhodopseudomonas palustris TIE-1, complete genome

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from an iron-rich microbial mat from School Street Marsh in Woods Hole, MA, USA. It grows photoautotrophically with Fe(II), H2, or thiosulfate as the electron donor, photoheterotrophically with a variety of organic carbon sources and chemoheterotrophically in the dark. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
41839934184628636transcriptional regulator TetR familyQuickGO ontologyBLASTP
41846504185078429CBS domain containing proteinQuickGO ontologyBLASTP
41853164186086771Rhomboid family proteinQuickGO ontologyBLASTP
41865714187140570protein of unknown function DUF1457QuickGO ontology
41871104187874765putative transcriptional regulator CrpFnr familyQuickGO ontologyBLASTP
41883144188925612type IV pilus assembly PilZQuickGO ontologyBLASTP
41892574189877621transglutaminase family protein cysteine peptidase BTLCPQuickGO ontologyBLASTP
41920914192369279hypothetical protein
41923694192626258hypothetical protein
41930824193204123hypothetical protein
41936464194314669hypothetical protein
41946694194884216hypothetical protein
41962554196842588transcriptional regulator MarR familyQuickGO ontologyBLASTP
419736741988661500porinQuickGO ontologyBLASTP
41990894199279191
41993024199469168hypothetical protein
41994994200029531hypothetical proteinBLASTP
42000894200421333hypothetical protein
42005884201319732conserved hypothetical protein putative exported proteinQuickGO ontology
42013364201554219hypothetical proteinBLASTP
42017234202550828serine O-acetyltransferaseQuickGO ontologyBLASTP
42027714203526756alphabeta hydrolase foldQuickGO ontologyBLASTP
420369642048441149putative exported protein of unknown functionQuickGO ontologyBLASTP
42050504205295246hypothetical proteinBLASTP
420531442065071194monooxygenase FAD-bindingQuickGO ontologyBLASTP
42065484206952405conserved hypothetical protein putative signal peptideQuickGO ontology
42071164207544429UspA domain proteinQuickGO ontologyBLASTP
42076414208501861protein of unknown function DUF23QuickGO ontologyBLASTP
42085604209018459DNA mismatch endonuclease VsrQuickGO ontologyBLASTP
420901842107631746protein of unknown function DUF87QuickGO ontologyBLASTP
421077742127261950hypothetical proteinBLASTP
421272342142251503DNA-cytosine methyltransferaseQuickGO ontologyBLASTP
4214520421460889tRNA-LeuQuickGO ontology
421496742161541188amidohydrolaseQuickGO ontologyBLASTP
421614742175621416AmidaseQuickGO ontologyBLASTP
42176944218584891Enoyl-CoA hydrataseisomeraseQuickGO ontologyBLASTP
42186094219385777BLASTP
42194124220401990fumarylacetoacetate FAA hydrolaseQuickGO ontologyBLASTP
42205294221239711transcriptional regulator GntR familyQuickGO ontologyBLASTP
422126442229851722AMP-dependent synthetase and ligaseQuickGO ontologyBLASTP
422314642240338883-hydroxyisobutyrate dehydrogenaseQuickGO ontologyBLASTP
422406742251401074Enoyl-CoA hydrataseisomeraseQuickGO ontologyBLASTP
422513742262941158acyl-CoA dehydrogenase domain proteinQuickGO ontologyBLASTP