Pre_GI Gene

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Host: NC_010581 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010581:2999002 Beijerinckia indica subsp. indica ATCC 9039, complete genome

Host Lineage: Beijerinckia indica; Beijerinckia; Beijerinckiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: It produces a water-soluble extracellular polysaccharide that forms a biopolymer useful for a wide range of applications to textile printing, oil and adhesive industries. This organism belongs to the Beijerinckiaceae family, which includes both methanotrophic (bacteria able to oxidize methane) and nonmethanotrophic species (like Beijerinckia indica subsp. indica). Sequencing of strains from this family presents an ideal opportunity for a comparative genomic study into the evolution and biochemistry of obligate methanotrophy.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
29990022999895894transcriptional regulator LysR familyQuickGO ontologyBLASTP
29999603000594635BLASTP
30007083001430723peptidase M10A and M12B matrixin and adamalysinQuickGO ontologyBLASTP
30015033002230728BLASTP
300250730038111305nucleotide sugar dehydrogenaseQuickGO ontologyBLASTP
30040573004848792transcriptional regulator ModE familyQuickGO ontologyBLASTP
30048903005138249hypothetical protein
300514330065551413mannose-1-phosphate guanylyltransferasemannose-6-phosphate isomeraseQuickGO ontologyBLASTP
300721130095232313Endo-14-beta-xylanaseQuickGO ontologyBLASTP
300971630119352220capsular exopolysaccharide familyQuickGO ontologyBLASTP
301200530132011197glycosyl transferase group 1QuickGO ontologyBLASTP
30140763014195120BLASTP
30147413015559819hypothetical proteinBLASTP
30157093016521813glycosyl transferase WecBTagACpsF familyQuickGO ontologyBLASTP
30166333016898266BLASTP
301735730183971041glycosyl transferase group 1QuickGO ontologyBLASTP
301845030195411092acyltransferase 3QuickGO ontologyBLASTP
30196003020454855BLASTP
302046430219061443polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
30224153022835421BLASTP
302309630241811086acyltransferase 3QuickGO ontologyBLASTP
30242023025200999NAD-dependent epimerasedehydrataseQuickGO ontologyBLASTP
302575330271531401hypothetical proteinBLASTP
30273403027906567hypothetical proteinBLASTP
302810730292111105BLASTP
30292863029689404BLASTP
30299503030240291hypothetical protein
30305483030679132
30311913031424234BLASTP
303169130333341644BLASTP
303340830346311224integrase family proteinQuickGO ontologyBLASTP
30347373034925189YcfA family proteinQuickGO ontologyBLASTP
30349303035328399protein of unknown function UPF0150QuickGO ontologyBLASTP
30355463036076531hypothetical protein
30360803036325246hypothetical protein
30365293037212684hypothetical protein
303730130383591059hypothetical proteinBLASTP
303900030414442445N-6 DNA methylaseQuickGO ontologyBLASTP
304144130426881248restriction modification system DNA specificity domainQuickGO ontologyBLASTP
304268530457683084type I site-specific deoxyribonuclease HsdR familyQuickGO ontologyBLASTP
30457583046489732protein of unknown function DUF45QuickGO ontologyBLASTP