Pre_GI: BLASTP Hits

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Query: NC_010581:2999002:3041441 Beijerinckia indica subsp. indica ATCC 9039, complete genome

Start: 3041441, End: 3042688, Length: 1248

Host Lineage: Beijerinckia indica; Beijerinckia; Beijerinckiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: It produces a water-soluble extracellular polysaccharide that forms a biopolymer useful for a wide range of applications to textile printing, oil and adhesive industries. This organism belongs to the Beijerinckiaceae family, which includes both methanotrophic (bacteria able to oxidize methane) and nonmethanotrophic species (like Beijerinckia indica subsp. indica). Sequencing of strains from this family presents an ideal opportunity for a comparative genomic study into the evolution and biochemistry of obligate methanotrophy.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014550:2562053:2590617259061725918701254Arthrobacter arilaitensis Re117, complete genometype I restriction-modification system specificity subunit7e-60231
NC_009953:3224412:3233728323372832349661239Salinispora arenicola CNS-205 chromosome, complete genomerestriction endonuclease S subunits-like protein8e-59228
NC_015942:2213710:2227462222746222287601299Acidithiobacillus ferrivorans SS3 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein4e-51202
NC_014216:2334568:2339611233961123409301320Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomerestriction modification system DNA specificity domain protein1e-41171
NC_019977:1353332:1361527136152713627771251Methanomethylovorans hollandica DSM 15978, complete genomerestriction endonuclease S subunit3e-39163
NC_010994:859500:8739068739068751801275Rhizobium etli CIAT 652, complete genomeprobable type I restriction-modification system protein, specificity subunit3e-38159
NC_015635:4864349:4880217488021748814341218Microlunatus phosphovorus NM-1, complete genometype I restriction-modification system specificity subunit1e-36154
NC_019902:1863162:1874009187400918753281320Thioalkalivibrio nitratireducens DSM 14787, complete genomeType I restriction-modification system, specificity subunit S1e-33144
NC_009943:272158:2834502834502846311182Candidatus Desulfococcus oleovorans Hxd3, complete genomerestriction modification system DNA specificity domain3e-33142
NC_003901:2727361:2735284273528427365041221Methanosarcina mazei Go1, complete genometype I restriction-modification system specificity subunit1e-32140
NC_003272:3275413:3277624327762432789071284Nostoc sp. PCC 7120, complete genometype I restriction-modification enzyme S subunit8e-32138
NC_013037:6281164:6322095632209563233631269Dyadobacter fermentans DSM 18053, complete genomerestriction modification system DNA specificity domain6e-31135
NC_017187:814940:8241198241198254171299Arcobacter butzleri ED-1, complete genomerestriction-modification system DNA specificity subunit2e-30133
NC_016051:1005188:1012531101253110138171287Thermococcus sp. AM4 chromosome, complete genomeType I restriction-modification system specificity subunit S1e-29131
NC_016026:1224129:1234454123445412357431290Micavibrio aeruginosavorus ARL-13 chromosome, complete genometype I restriction modification DNA specificity domain-containing protein9e-30131
NC_011901:1860887:1891507189150718927661260Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completetype I restriction-modification system specificity subunit1e-27124
NC_007164:1434305:1473658147365814748811224Corynebacterium jeikeium K411, complete genomeputative DNA restriction-modification system, specificity subunit3e-27123
NC_016590:1380092:1386288138628813874661179Burkholderia sp. YI23 chromosome 3, complete sequencerestriction endonuclease S subunits-like protein3e-27123
NC_012440:1215838:1228897122889712302431347Persephonella marina EX-H1, complete genometype I restriction-modification system specificty subunit7e-25115
NC_013235:5127148:5143727514372751449621236Nakamurella multipartita DSM 44233, complete genomeRestriction endonuclease S subunits-like protein9e-25115
NC_017271:1289278:129730312973031297995693Xanthomonas campestris pv. raphani 756C chromosome, completetype I restriction-modification system specificity subunit3e-24113
NC_013720:1382561:1397756139775613990211266Pirellula staleyi DSM 6068, complete genomerestriction modification system DNA specificity domain protein7e-24112
NC_005139:796546:8174068174068187071302Vibrio vulnificus YJ016 chromosome I, complete sequencerestriction endonuclease S subunit2e-23110
NC_015161:1556766:1592163159216315933531191Deinococcus proteolyticus MRP chromosome, complete genomerestriction modification system DNA specificity domain-containing protein5e-23108
NC_014328:303063:3449343449343461871254Clostridium ljungdahlii ATCC 49587 chromosome, complete genometype I restriction enzyme, specificity subunit7e-23108
NC_011283:5011497:5019495501949550208621368Klebsiella pneumoniae 342 chromosome, complete genometype I restriction modification DNA specificity domain protein5e-22105
NC_008054:899441:9101449101449113791236Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeType I restriction-modification system, specificity subunit3e-21103
NC_017221:535000:5462305462305474921263Bifidobacterium longum subsp. longum KACC 91563 chromosome,restriction endonuclease S subunit3e-21103
NC_007086:1457531:1464058146405814653051248Xanthomonas campestris pv. campestris str. 8004, complete genometype I restriction enzyme (specificity chain) homolog2e-21103
NC_010688:1435694:1442200144220014434471248Xanthomonas campestris pv. campestris, complete genometype I site-specific DNA methyltransferase specificity subunit2e-21103
NC_003902:3430051:3445487344548734467341248Xanthomonas campestris pv. campestris str. ATCC 33913, completetype I restriction enzyme specificity chain-like protein2e-21103
NC_009665:2602000:2614480261448026157631284Shewanella baltica OS185 chromosome, complete genomerestriction modification system DNA specificity subunit2e-21103
NC_014414:1104386:1119888111988811210871200Parvularcula bermudensis HTCC2503 chromosome, complete genometype I restriction-modification system specificity subunit2e-21103
NC_017338:436711:4382604382604394951236Staphylococcus aureus subsp. aureus JKD6159 chromosome, completetype I restriction modification system, site specificity determination subunit, HsdS_11e-20101
NC_015587:90539:9754297542988611320Hydrogenobaculum sp. SHO chromosome, complete genomerestriction modification system DNA specificity domain protein3e-20100
NC_020411:90538:9754197541988601320Hydrogenobaculum sp. HO, complete genomerestriction modification system DNA specificity domain containing protein3e-20100
NC_015557:90503:9750697506988251320Hydrogenobaculum sp. 3684 chromosome, complete genomerestriction modification system DNA specificity domain protein3e-20100
NC_014934:3786132:3798582379858237997571176Cellulophaga algicola DSM 14237 chromosome, complete genomerestriction modification system DNA specificity domain protein2e-20100
NC_014169:1784435:1795590179559017967861197Bifidobacterium longum subsp. longum JDM301 chromosome, completerestriction endonuclease S subunit5e-2099.4
NC_006672:47610:6642766427676351209Gluconobacter oxydans 621H plasmid pGOX1, complete sequenceType I restriction-modification enzyme S subunit2e-1997.1
NC_011830:4187362:4191475419147541926951221Desulfitobacterium hafniense DCB-2, complete genomerestriction modification system DNA specificity domain protein4e-1996.3
NC_016047:2480921:2491021249102124922981278Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completetype I restriction-modification enzyme, S subunit3e-1893.2
NC_012779:3316877:333351633335163334487972Edwardsiella ictaluri 93-146, complete genomehypothetical protein3e-1893.2
NC_014169:1784435:1800006180000618010341029Bifidobacterium longum subsp. longum JDM301 chromosome, completerestriction endonuclease S subunit1e-1791.3
NC_013592:446092:4545344545344557241191Dickeya dadantii Ech586, complete genomerestriction modification system DNA specificity domain protein1e-1791.3
NC_016023:267581:2798362798362811191284Bacillus coagulans 36D1 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein2e-1790.9
NC_013508:3188978:3232492323249232338171326Edwardsiella tarda EIB202, complete genometype I restriction modification DNA specificity domain protein3e-1789.7
NC_009832:4521585:4538281453828145395101230Serratia proteamaculans 568, complete genomerestriction modification system DNA specificity domain4e-1789.4
NC_007575:973559:9842349842349854961263Sulfurimonas denitrificans DSM 1251, complete genomerestriction modification system DNA specificity subunit7e-1788.6
NC_013929:3299736:332822233282223328884663Streptomyces scabiei 87.22 chromosome, complete genometype I restriction protein fragment2e-1687
NC_014002:1061501:1071126107112610723701245Methanohalophilus mahii DSM 5219 chromosome, complete genomerestriction modification system DNA specificity domain protein8e-1685.1
NC_016620:781995:7957407957407969781239Bacteriovorax marinus SJ, complete genomeputative type I restriction enzyme specificity protein2e-1584
NC_021064:793098:8041978041978054261230Propionibacterium avidum 44067, complete genometype I restriction modification DNA specificity domain protein3e-1583.2
NC_007759:2097734:2114849211484921160631215Syntrophus aciditrophicus SB, complete genometype I restriction-modification system specificity subunit3e-1480.1
NC_012108:2194251:2194251219425121955311281Desulfobacterium autotrophicum HRM2, complete genomeHsdS25e-1479.3
NC_013216:4404085:442522544252254426088864Desulfotomaculum acetoxidans DSM 771, complete genomehypothetical protein5e-1479.3
NC_014314:212579:2201042201042213391236Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completerestriction modification system DNA specificity domain-containing protein6e-1479
NC_009925:647752:6642866642866654341149Acaryochloris marina MBIC11017, complete genometype I restriction-modification enzyme S subunit8e-1478.6
NC_006322:4149500:4166640416664041678031164Bacillus licheniformis ATCC 14580, complete genomehypothetical protein8e-1478.6
NC_006270:4149004:4166525416652541676881164Bacillus licheniformis ATCC 14580, complete genomeHsdS8e-1478.6
NC_008611:3579500:359645435964543597116663Mycobacterium ulcerans Agy99, complete genome8e-1478.6
NC_011149:4677412:4701711470171147028591149Salmonella enterica subsp. enterica serovar Agona str. SL483,type I restriction-modification system, endonuclease S subunit8e-1478.6
NC_015138:5342473:5353136535313653544401305Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completerestriction modification system DNA specificity domain-containing protein1e-1378.2
NC_009328:814530:8393888393888409171530Geobacillus thermodenitrificans NG80-2 chromosome, complete genometype I specificity subunit HsdS9e-1375.1
NC_018876:587094:6087896087896100811293Methanolobus psychrophilus R15 chromosome, complete genometype I restriction-modification system, S subunit1e-1274.7
NC_012778:1573847:1588985158898515902351251Eubacterium eligens ATCC 27750, complete genometype I restriction enzyme2e-1274.3
NC_014915:2427000:2444743244474324460321290Geobacillus sp. Y412MC52 chromosome, complete genomerestriction modification system DNA specificity domain protein3e-1273.6
NC_013411:284461:2934562934562947451290Geobacillus sp. Y412MC61, complete genomerestriction modification system DNA specificity domain protein3e-1273.6
NC_007356:51080:927019270193369669Dehalococcoides sp. CBDB1, complete genomeputative type I restriction enzyme, specificity protein6e-1272.4
NC_002937:1764117:1781460178146017824791020Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetype I restriction-modification enzyme, S subunit7e-1272
NC_008751:607209:6192036192036205191317Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomerestriction modification system DNA specificity domain1e-1171.2
NC_015942:1711026:171765417176541717941288Acidithiobacillus ferrivorans SS3 chromosome, complete genomehypothetical protein2e-1170.9
NC_015562:755785:7636407636407649591320Methanotorris igneus Kol 5 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein8e-1168.6
NC_008786:2729635:2739305273930527405851281Verminephrobacter eiseniae EF01-2, complete genomerestriction modification system DNA specificity domain8e-1168.6
NC_009715:1470419:1483709148370914852951587Campylobacter curvus 525.92 chromosome, complete genomeputative type I restriction-modification system, S subunit7e-1168.6
NC_012489:209016:2143972143972157341338Gemmatimonas aurantiaca T-27, complete genometype I restriction-modification system restriction subunit2e-1067.4
NC_018721:3155579:3166677316667731679571281Psychroflexus torquis ATCC 700755 chromosome, complete genometype I restriction-modification system, specificity subunit S HsdS2e-1067.4
NC_006510:2910000:2931510293151029328261317Geobacillus kaustophilus HTA426, complete genometype I restriction-modification system specificity determinant6e-1065.9
NC_011761:1357799:1368452136845213696511200Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completetype I restriction-modification system subunit S8e-1065.5
NC_013799:1:1649316493177731281Hydrogenobacter thermophilus TK-6, complete genomerestriction endonuclease S subunit1e-0964.7
NC_017161:1:1655416554178341281Hydrogenobacter thermophilus TK-6 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-0964.7
NC_015320:1690047:1699124169912417003861263Archaeoglobus veneficus SNP6 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-0964.7
NC_017080:3317701:3326137332613733274981362Phycisphaera mikurensis NBRC 102666, complete genometype I restriction-modification system specificity subunit1e-0964.7
NC_015953:3227000:3236026323602632372041179Streptomyces sp. SirexAA-E chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-0964.3
NC_011899:2165814:2178735217873521804321698Halothermothrix orenii H 168, complete genomerestriction modification system DNA specificity domain protein2e-0964.3
NC_008358:2638245:2693495269349526946401146Hyphomonas neptunium ATCC 15444, complete genometype I restriction-modification system, S subunit2e-0964.3
NC_017371:1470582:147328614732861473843558Helicobacter pylori Gambia94/24 chromosome, complete genometype I R-M system specificity subunit2e-0963.9
NC_014643:2056280:2064525206452520656281104Rothia dentocariosa ATCC 17931 chromosome, complete genometype I restriction modification enzyme protein S2e-0963.9
NC_014650:1893758:1911301191130119125301230Geobacillus sp. Y4.1MC1 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein3e-0963.5
NC_018604:2579000:2603755260375526049511197Brachyspira pilosicoli WesB complete genometype I restriction-modification enzyme S subunit3e-0963.5
NC_015222:3137167:3144490314449031457521263Nitrosomonas sp. AL212 chromosome, complete genomerestriction modification system DNA specificity domain5e-0962.4
NC_013943:2705983:2714857271485727160741218Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein6e-0962.4
NC_013203:202008:2370032370032381631161Atopobium parvulum DSM 20469, complete genomerestriction modification system DNA specificity domain protein6e-0962.4
NC_017068:2055500:2066538206653820676681131Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative type I restriction-modification system specificity subunit7e-0962
NC_014814:3892000:3907676390767639089381263Mycobacterium sp. Spyr1 chromosome, complete genomerestriction endonuclease S subunit8e-0962
NC_014815:6616500:6671211667121166724521242Micromonospora sp. L5 chromosome, complete genomerestriction modification system DNA specificity domain protein9e-0962
NC_018528:697553:696817696817697560744Lactobacillus helveticus R0052 chromosome, complete genomerestriction modification system DNA specificity subunit1e-0861.2
NC_014752:1530000:153766215376621538321660Neisseria lactamica ST-640, complete genomerestriction modification system DNA specificity domain1e-0861.2
NC_011071:1178423:1189714118971411908081095Stenotrophomonas maltophilia R551-3, complete genomerestriction modification system DNA specificity domain2e-0860.5
NC_017378:1518529:1518529151852915196801152Helicobacter pylori Puno120 chromosome, complete genomerestriction modification system DNA specificity subunit3e-0860.1
NC_013406:1217385:1237662123766212388161155Paenibacillus sp. Y412MC10 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein6e-0858.9
NC_010337:616304:6289866289866306021617Heliobacterium modesticaldum Ice1, complete genometype i restriction modification DNA specificity domain7e-0858.9
NC_015458:2338437:2362859236285923641781320Pusillimonas sp. T7-7 chromosome, complete genomehypothetical protein8e-0858.5
NC_013199:845000:8452258452258464061182Lactobacillus rhamnosus Lc 705, complete genometype I restriction modification system DNA specificity domain, enzyme S protein (hsdS)1e-0758.2
NC_009665:2352528:2352528235252823543781851Shewanella baltica OS185 chromosome, complete genomerestriction modification system DNA specificity subunit1e-0758.2
NC_007298:1418500:141851114185111419368858Dechloromonas aromatica RCB, complete genomeRestriction modification system DNA specificity domain1e-0757.8
NC_006513:1547092:1555046155504615563201275Azoarcus sp. EbN1, complete genomerestriction modification system specificity subunit1e-0757.8
NC_019897:3613830:3634225363422536353971173Thermobacillus composti KWC4 chromosome, complete genomerestriction endonuclease S subunit2e-0757.8
NC_013440:3813132:3832106383210638333771272Haliangium ochraceum DSM 14365, complete genomerestriction modification system DNA specificity domain protein2e-0757
NC_009033:755226:7610247610247624151392Staphylothermus marinus F1, complete genomerestriction modification system DNA specificity domain3e-0756.6
NC_015942:668775:6882126882126894141203Acidithiobacillus ferrivorans SS3 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein4e-0756.2
NC_015416:621513:6339436339436351991257Methanosaeta concilii GP-6 chromosome, complete genometype I restriction-modification enzyme, S subunit2e-0653.9
NC_016831:4556761:4561353456135345626571305Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative Type I restriction-modification system specificity subunit M3e-0653.1
NC_011294:4604283:4608728460872846100321305Salmonella enterica subsp. enterica serovar Enteritidis strtype I restriction-modification system specificity subunit M3e-0653.1
NC_011274:4577402:4581994458199445832981305Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91type I restriction-modification system specificity subunit M3e-0653.1
NC_010003:1126800:1142463114246311437521290Petrotoga mobilis SJ95, complete genomerestriction modification system DNA specificity domain4e-0653.1
NC_011205:4761598:476604347660434766849807Salmonella enterica subsp. enterica serovar Dublin str. CT_020218536e-0652.4
NC_015660:3174424:3182135318213531835531419Geobacillus thermoglucosidasius C56-YS93 chromosome, completerestriction modification system DNA specificity domain-containing protein7e-0652.4