Pre_GI Gene

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Host: NC_010557 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010557:679656 Burkholderia ambifaria MC40-6 chromosome 3, complete sequence

Host Lineage: Burkholderia ambifaria; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from a cystic fibrosis patient. These bacteria present great versatility to adapt to diverse environments, and are capable of degrading pollutants in water and soil, and fixing atmospheric nitrogen. This species include strains isolated from cystic fibrosis patients as well as strains with potential use in biocontrol.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
6796566807081053transposase IS605 OrfB familyQuickGO ontologyBLASTP
6808316824531623chaperonin GroELQuickGO ontologyBLASTP
682531682848318chaperonin Cpn10QuickGO ontologyBLASTP
683020683658639hypothetical proteinBLASTP
684281684517237hypothetical protein
684663684905243hypothetical protein
685120685359240hypothetical protein
685422685637216hypothetical proteinBLASTP
685687685998312hypothetical proteinBLASTP
686068686304237hypothetical proteinBLASTP
686830687144315hypothetical proteinBLASTP
687760688086327hypothetical proteinBLASTP
688086688616531short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
6890646901731110Extracellular ligand-binding receptorQuickGO ontologyBLASTP
6907656919461182aminotransferase class I and IIQuickGO ontologyBLASTP
691986692936951inner-membrane translocatorQuickGO ontologyBLASTP
6929566941251170inner-membrane translocatorQuickGO ontologyBLASTP
694147694920774ABC transporter relatedQuickGO ontologyBLASTP
694920695636717ABC transporter relatedQuickGO ontologyBLASTP
6959636971951233transcriptional regulator MarR familyQuickGO ontologyBLASTP
6975856990391455AmidaseQuickGO ontologyBLASTP
6990767003051230major facilitator superfamily MFS_1QuickGO ontologyBLASTP
700328701266939hypothetical proteinBLASTP
7013457023731029transcriptional regulator AraC familyQuickGO ontologyBLASTP
702640703509870transcriptional regulator AraC familyQuickGO ontologyBLASTP
7038397049031065branched-chain amino acid aminotransferaseQuickGO ontologyBLASTP
7051227066031482Aldehyde DehydrogenaseQuickGO ontologyBLASTP
706808707344537hypothetical proteinBLASTP
707358707927570thiamine pyrophosphate protein domain protein TPP-bindingQuickGO ontologyBLASTP
7080917098001710glucose-methanol-choline oxidoreductaseQuickGO ontologyBLASTP
709748710632885HpcHHpaI aldolaseQuickGO ontologyBLASTP
710652711068417thioesterase superfamily proteinQuickGO ontologyBLASTP
7110897123451257L-carnitine dehydratasebile acid-inducible protein FQuickGO ontologyBLASTP
712468713370903transcriptional regulator LysR familyQuickGO ontologyBLASTP
713503714435933transcriptional regulator LysR familyQuickGO ontologyBLASTP
7145787157891212major facilitator superfamily MFS_1QuickGO ontologyBLASTP
7157957166918972-dehydropantoate 2-reductaseQuickGO ontologyBLASTP
7170097186731665major facilitator superfamily MFS_1QuickGO ontologyBLASTP
718813719517705haloacid dehalogenase type IIQuickGO ontologyBLASTP
719719720663945transcriptional regulator LysR familyQuickGO ontologyBLASTP
7209977222231227Diaminopropionate ammonia-lyaseQuickGO ontologyBLASTP
722460722921462Endoribonuclease L-PSPQuickGO ontologyBLASTP
7230397243551317sodiumdicarboxylate symporterQuickGO ontologyBLASTP
724454725359906transcriptional regulator LysR familyQuickGO ontologyBLASTP
725608726225618aspartate racemaseQuickGO ontologyBLASTP
726498726962465GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
727445727765321hypothetical proteinBLASTP
7282307294861257Cystathionine gamma-synthaseQuickGO ontologyBLASTP
7295467308951350glutathione-disulfide reductaseQuickGO ontologyBLASTP
730892731800909protein of unknown function DUF6 transmembraneQuickGO ontologyBLASTP
731856732773918cysteine synthase AQuickGO ontologyBLASTP
7328247338551032Alcohol dehydrogenase GroES domain proteinQuickGO ontologyBLASTP
734015734767753short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
7348097360351227OsmC family proteinQuickGO ontologyBLASTP
7360467372091164amine oxidaseQuickGO ontologyBLASTP
737212737880669anti-ECFsigma factor ChrRQuickGO ontologyBLASTP
737958738302345alkylhydroperoxidase like protein AhpD familyQuickGO ontologyBLASTP
738363738644282hypothetical proteinBLASTP
738709739482774short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
739791740717927transcriptional regulator LysR familyQuickGO ontologyBLASTP
740790741362573transcriptional regulator TetR familyQuickGO ontologyBLASTP
741477742364888peptidase S15QuickGO ontologyBLASTP
742382743209828short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP