Pre_GI: BLASTP Hits

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Query: NC_010557:679656:702640 Burkholderia ambifaria MC40-6 chromosome 3, complete sequence

Start: 702640, End: 703509, Length: 870

Host Lineage: Burkholderia ambifaria; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from a cystic fibrosis patient. These bacteria present great versatility to adapt to diverse environments, and are capable of degrading pollutants in water and soil, and fixing atmospheric nitrogen. This species include strains isolated from cystic fibrosis patients as well as strains with potential use in biocontrol.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008392:1029134:103421010342101034986777Burkholderia cepacia AMMD chromosome 3, complete sequencetranscriptional regulator, AraC family1e-137489
NC_016830:1645879:166343616634361664242807Pseudomonas fluorescens F113 chromosome, complete genomearaC family transcriptional regulator1e-66253
NC_013850:3340882:336885833688583369664807Klebsiella variicola At-22 chromosome, complete genomeAraC protein arabinose-binding/dimerization1e-65250
NC_020260:2725201:273201127320112732829819Cronobacter sakazakii Sp291, complete genomeAraC family transcriptional regulator2e-62239
NC_005773:5310339:532689853268985327734837Pseudomonas syringae pv. phaseolicola 1448A, complete genometranscriptional regulator, AraC family9e-28124
NC_016816:2925459:292545929254592926304846Pantoea ananatis LMG 5342, complete genomeAraC family transcriptional regulator2e-27122
NC_004547:667988:688832688832689677846Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeAraC-family transcriptional regulator6e-27121
NC_010002:3357752:337748733774873378314828Delftia acidovorans SPH-1, complete genometranscriptional regulator, AraC family8e-23107
NC_004129:5723787:575189957518995752744846Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, AraC family5e-21101
NC_015559:3511231:351357435135743514419846Marinomonas posidonica IVIA-Po-181 chromosome, complete genomeAraC family transcriptional regulator9e-1994.4
NC_016445:2593800:262314126231412623944804Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeAraC/XylS family transcriptional regulator2e-1790.1
NC_016944:168530:197883197883198695813Vibrio cholerae IEC224 chromosome I, complete sequenceAraC/XylS family transcriptional regulator2e-1790.1
NC_002505:168532:197873197873198685813Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetranscriptional regulator, AraC/XylS family2e-1790.1
NC_009654:4624459:463007746300774630919843Marinomonas sp. MWYL1, complete genomeAraC family transcriptional regulator3e-1789.4
NC_015733:2194676:220721222072122208114903Pseudomonas putida S16 chromosome, complete genomeAraC family transcriptional regulator5e-1788.6
NC_016935:3103430:311173231117323112508777Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator4e-1685.5
NC_015690:2553837:256220525622052562981777Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC protein, arabinose-binding/dimerization4e-1685.5
NC_010501:3013103:301614130161413016962822Pseudomonas putida W619, complete genometranscriptional regulator, AraC family5e-1581.6
NC_002947:3404000:340862234086223409431810Pseudomonas putida KT2440, complete genometranscriptional regulator, AraC family7e-1581.3
NC_012881:1062629:106437510643751065232858Desulfovibrio salexigens DSM 2638, complete genometranscriptional regulator, AraC family1e-1480.9
NC_017986:5509569:551342855134285514114687Pseudomonas putida ND6 chromosome, complete genomeAraC family transcriptional regulator5e-1478.6
NC_015589:38418:583045830459131828Desulfotomaculum ruminis DSM 2154 chromosome, complete genomehelix-turn-helix- domain-containing protein AraC type2e-1376.6
NC_016818:3887000:392219039221903922996807Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeDNA-binding domain-containing protein5e-1375.5
NC_016633:541559:555866555866556687822Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeDNA-binding domain-containing protein6e-1374.7
NC_016047:345491:350438350438351265828Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeAraC/XylS family transcriptional regulator8e-1374.7
NC_020291:552104:571737571737572579843Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometranscriptional regulator, AraC family1e-1273.9
NC_015410:2505168:251160125116012512404804Pseudomonas mendocina NK-01 chromosome, complete genomeAraC family transcriptional regulator1e-1273.6
NC_014624:2569604:257139625713962572262867Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein2e-1273.6
NC_013131:7437831:744729274472927448035744Catenulispora acidiphila DSM 44928, complete genometranscriptional regulator, AraC family1e-1170.5
NC_014844:762794:781918781918782757840Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeAraC type helix-turn-helix- domain-containing protein5e-1168.6
NC_010681:1234500:125113612511361252074939Burkholderia phytofirmans PsJN chromosome 1, complete sequencetranscriptional regulator, AraC family1e-0963.9
NC_006322:203932:227318227318227626309Bacillus licheniformis ATCC 14580, complete genomeYbfI11e-0963.5
NC_004547:843475:846356846356847111756Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeAraC-family transcriptional regulator2e-0963.5
NC_009348:2362163:238571223857122386632921Aeromonas salmonicida subsp. salmonicida A449, complete genomeAraC family transcriptional regulator3e-0962.8
NC_014100:449541:469746469746470255510Caulobacter segnis ATCC 21756 chromosome, complete genomeAraC family transcriptional regulator3e-0962.8
NC_013720:5769910:577557757755775776428852Pirellula staleyi DSM 6068, complete genometranscriptional regulator, AraC family4e-0962.4
NC_016584:487613:499304499304500050747Desulfosporosinus orientis DSM 765 chromosome, complete genometranscriptional regulator5e-0962
NC_010681:1234500:125237712523771253267891Burkholderia phytofirmans PsJN chromosome 1, complete sequencetranscriptional regulator, AraC family7e-0961.6
NC_016078:3130573:313274431327443133640897Pelagibacterium halotolerans B2 chromosome, complete genomeAraC family transcriptional regulator7e-0961.2
NC_016631:3245501:325872632587263259574849Granulicella mallensis MP5ACTX8 chromosome, complete genomeAraC family transcriptional regulator7e-0961.2
NC_008751:607209:607209607209608048840Desulfovibrio vulgaris subsp. vulgaris DP4, complete genometranscriptional regulator, AraC family8e-0961.2
NC_003155:4906639:492314449231444923956813Streptomyces avermitilis MA-4680, complete genomeAraC-family transcriptional regulator1e-0860.5
NC_003888:4613000:461515446151544615969816Streptomyces coelicolor A3(2), complete genomeAraC-family transcriptional regulator1e-0860.5
NC_016935:2069562:209206820920682092916849Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator2e-0860.1
NC_015690:1542061:156474015647401565588849Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator2e-0860.1
NC_015723:280368:291558291558292412855Cupriavidus necator N-1 chromosome 2, complete sequenceAraC family transcriptional regulator2e-0859.7
NC_016631:6081384:609364760936476094531885Granulicella mallensis MP5ACTX8 chromosome, complete genomeAraC family transcriptional regulator8e-0858.2
NC_000911:15937:206152061521595981Synechocystis sp. PCC 6803, complete genomeregulatory protein; PchR7e-0858.2
NC_017039:15937:206152061521595981Synechocystis sp. PCC 6803 substr. PCC-P, complete genomeregulatory protein PchR7e-0858.2
NC_017052:15937:206152061521595981Synechocystis sp. PCC 6803 substr. PCC-N, complete genomeregulatory protein PchR7e-0858.2
NC_017277:15937:206152061521595981Synechocystis sp. PCC 6803, complete genomeregulatory protein PchR7e-0858.2
NC_015856:764651:780275780275781222948Collimonas fungivorans Ter331 chromosome, complete genomeAraC family transcriptional regulator9e-0857.8
NC_014973:243000:247572247572248330759Geobacter sp. M18 chromosome, complete genometwo component AraC family transcriptional regulator1e-0757.8
NC_012214:2019000:203667520366752037016342Erwinia pyrifoliae Ep1/96, complete genomeTranscriptional regulator, AraC family1e-0757.4
NC_020126:1943092:195779819577981958646849Myxococcus stipitatus DSM 14675, complete genomeAraC family transcriptional regulator1e-0757
NC_009952:2381601:240977624097762410660885Dinoroseobacter shibae DFL 12, complete genomeputative transcriptional regulator2e-0757
NC_018645:4945698:4945698494569849467051008Desulfobacula toluolica Tol2, complete genomeAraC family transcriptional regulator2e-0756.6
NC_014963:2759978:277227027722702773157888Terriglobus saanensis SP1PR4 chromosome, complete genomeAraC family transcriptional regulator2e-0756.6
NC_011283:1178500:118002211800221180375354Klebsiella pneumoniae 342 chromosome, complete genomeAraC family transcriptional regulator2e-0756.2
NC_009436:2056000:206845420684542069380927Enterobacter sp. 638, complete genomeAraC family transcriptional regulator3e-0756.2
NC_007348:2519447:253617125361712536377207Ralstonia eutropha JMP134 chromosome 2, complete sequence3e-0756.2
NC_020302:1241504:124750612475061248498993Corynebacterium halotolerans YIM 70093 = DSM 44683, completeAraC family transcriptional regulator3e-0755.8
NC_009648:1882500:188609218860921887006915Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative ARAC-type regulatory protein5e-0755.5
NC_016845:2655512:266169226616922662606915Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative ARAC-type regulatory protein5e-0755.5
NC_014541:1617678:163751416375141638503990Ferrimonas balearica DSM 9799 chromosome, complete genometranscriptional regulator, AraC family4e-0755.5
NC_014973:4174668:419493541949354195723789Geobacter sp. M18 chromosome, complete genomeAraC family transcriptional regulator4e-0755.5
NC_008027:2397255:2419669241966924206761008Pseudomonas entomophila L48, complete genometranscriptional regulator, AraC family6e-0755.1
NC_013222:3060482:307788530778853078856972Robiginitalea biformata HTCC2501, complete genometranscriptional regulator7e-0754.7
NC_015957:1070500:109744310974431098348906Streptomyces violaceusniger Tu 4113 chromosome, complete genomeAraC family transcriptional regulator7e-0754.7
NC_016582:6999074:700411870041187004807690Streptomyces bingchenggensis BCW-1 chromosome, complete genomeAraC family transcriptional regulator1e-0654.3
NC_014034:1507047:1509310150931015104011092Rhodobacter capsulatus SB1003 chromosome, complete genomeAraC family transcriptional regulator1e-0654.3
NC_020453:7826358:785191078519107852845936Agromonas oligotrophica S58 DNA, complete genomeAraC family transcriptional regulator9e-0754.3
NC_020126:7372685:738728873872887388130843Myxococcus stipitatus DSM 14675, complete genomeAraC family transcriptional regulator1e-0653.9
NC_006155:1916426:194082719408271941786960Yersinia pseudotuberculosis IP 32953, complete genometranscriptional regulator YbtA2e-0653.5
NC_005810:1794490:181909118190911820050960Yersinia pestis biovar Microtus str. 91001, complete genometranscriptional regulator YbtA2e-0653.5
NC_011742:2002526:200628420062842007243960Escherichia coli S88 chromosome, complete genomeAraC family transcriptional regulator2e-0653.5
NC_007946:2074098:207785620778562078815960Escherichia coli UTI89, complete genomeputative AraC type regulator2e-0653.5
CU928145:2237099:224085722408572241816960Escherichia coli 55989 chromosome, complete genomeAraC type regulator of yersiniabactin gene cluster (HPI)2e-0653.5
NC_011748:2237099:224085722408572241816960Escherichia coli 55989, complete genomeAraC family transcriptional regulator2e-0653.5
NC_008563:2094855:209861320986132099572960Escherichia coli APEC O1, complete genomeputative AraC type regulator2e-0653.5
NC_013361:2757168:276092627609262761885960Escherichia coli O26:H11 str. 11368 chromosome, complete genomeDNA-binding transcriptional regulator2e-0653.5
CP002797:2025330:202908820290882030047960Escherichia coli NA114, complete genomeputative AraC type regulator protein2e-0653.5
NC_008150:1420825:144542614454261446385960Yersinia pestis Antiqua, complete genometranscriptional regulator YbtA2e-0653.5
NC_003143:2137945:216234721623472163306960Yersinia pestis CO92, complete genometranscriptional regulator YbtA2e-0653.5
NC_010634:1916000:194081119408111941770960Yersinia pseudotuberculosis PB1/+, complete genomeAraC family transcriptional regulator2e-0653.5
NC_015062:58826:588265882659182357Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequenceAraC family transcriptional regulator2e-0653.5
NC_020064:2299950:230477223047722305650879Serratia marcescens FGI94, complete genometranscriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain2e-0653.5
NC_004129:3452885:348470734847073485513807Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, AraC family2e-0653.5
NC_017160:2362002:237502823750282375987960Yersinia pestis D182038 chromosome, complete genometranscriptional regulator YbtA2e-0653.5
NC_017154:2137500:216191521619152162874960Yersinia pestis D106004 chromosome, complete genometranscriptional regulator YbtA2e-0653.5
NC_009381:1362471:137289313728931373852960Yersinia pestis Pestoides F chromosome, complete genometranscriptional regulator YbtA2e-0653.5
NC_011751:2281653:228541122854112286370960Escherichia coli UMN026 chromosome, complete genomeAraC family transcriptional regulator2e-0653.5
NC_004088:2640440:265349226534922654451960Yersinia pestis KIM, complete genomeAraC-type transcriptional regulator for yersiniabactin uptake and biosynthetic genes2e-0653.5
NC_010159:2164500:218905821890582190017960Yersinia pestis Angola, complete genomeyersiniabactin transcriptional regulator YbtA2e-0653.5
NC_012881:2957309:297100529710052971886882Desulfovibrio salexigens DSM 2638, complete genometranscriptional regulator, AraC family2e-0653.1
NC_011745:2168379:217213721721372173096960Escherichia coli ED1a chromosome, complete genomeAraC family transcriptional regulator2e-0653.1
NC_017986:5467279:546819554681955469016822Pseudomonas putida ND6 chromosome, complete genomeAraC family transcriptional regulator2e-0653.1
NC_008800:2806827:281909528190952820054960Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,transcriptional regulator YbtA2e-0653.1
NC_009512:3068495:308791530879153088736822Pseudomonas putida F1, complete genomehelix-turn-helix- domain containing protein, AraC type2e-0653.1
NC_011750:1134721:115407611540761155035960Escherichia coli IAI39 chromosome, complete genomeAraC family transcriptional regulator2e-0653.1
NC_004431:2185750:222597822259782226937960Escherichia coli CFT073, complete genomePutataive AraC type regulator2e-0653.1
NC_008253:1938975:197913719791371980096960Escherichia coli 536, complete genomeyersiniabactin transcriptional regulator, YbtA2e-0653.1
NC_015723:430165:445557445557446420864Cupriavidus necator N-1 chromosome 2, complete sequencetranscriptional regulator3e-0652.8
NC_007492:2035761:205437120543712055354984Pseudomonas fluorescens PfO-1, complete genomeTranscriptional Regulator, AraC family3e-0652.8
NC_021066:5342127:534681253468125347165354Raoultella ornithinolytica B6, complete genomemultiple antibiotic resistance protein marA4e-0652.4
NC_009656:115390:122819122819123664846Pseudomonas aeruginosa PA7 chromosome, complete genomeAraC family transcriptional regulator4e-0652.4
NC_014258:355845:375318375318376244927Pantoea vagans C9-1 plasmid pPag3, complete sequenceHTH-type transcriptional Activator RhaS3e-0652.4
NC_011751:1770376:179158517915851791839255Escherichia coli UMN026 chromosome, complete genomeputative HTH-type transcriptional regulator yqhC (fragment)3e-0652.4
NC_003295:2787371:280237428023742803273900Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSCRIPTION REGULATOR PROTEIN5e-0652
NC_013169:612456:646506646506647342837Kytococcus sedentarius DSM 20547, complete genomeDNA-binding domain-containing protein, AraC-type7e-0651.6
NC_017047:1934430:1949107194910719501201014Rahnella aquatilis HX2 chromosome, complete genometranscriptional activator FtrA7e-0651.2
NC_009921:7249249:725775972577597258187429Frankia sp. EAN1pec, complete genometranscriptional regulator, AraC family9e-0651.2