Pre_GI Gene

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Host: NC_010501 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010501:3671517 Pseudomonas putida W619, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
36715173672494978protein of unknown function DUF1527QuickGO ontologyBLASTP
367249436738491356hypothetical proteinBLASTP
36738463674151306hypothetical proteinBLASTP
367416136756991539hypothetical proteinBLASTP
36765173676882366hypothetical proteinBLASTP
36775573678495939domain of unknown function DUF1738QuickGO ontologyBLASTP
36785823678947366transcriptional regulator putativeQuickGO ontologyBLASTP
36790743679268195hypothetical proteinBLASTP
367948836811971710RelaxaseQuickGO ontologyBLASTP
36813903682103714hypothetical proteinBLASTP
368247736837901314outer membrane porinQuickGO ontologyBLASTP
36841423684924783short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
36849563685747792Enoyl-CoA hydrataseisomeraseQuickGO ontologyBLASTP
368574436869251182acetyl-CoA acetyltransferaseQuickGO ontologyBLASTP
368695436886271674AMP-dependent synthetase and ligaseQuickGO ontologyBLASTP
368864236897001059L-carnitine dehydratasebile acid-inducible protein FQuickGO ontologyBLASTP
368969736908421146acyl-CoA dehydrogenase domain proteinQuickGO ontologyBLASTP
369087836920471170transcriptional regulator AraC familyQuickGO ontologyBLASTP
36923153692656342short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
36926533692865213short chain dehydrogenaseQuickGO ontologyBLASTP
369317736942051029transcriptional regulator AraC familyQuickGO ontologyBLASTP
36947053695406702nitroreductaseQuickGO ontologyBLASTP
369555236973361785acyl-CoA dehydrogenase domain proteinQuickGO ontologyBLASTP
36974023698382981transposase IS4 family proteinQuickGO ontologyBLASTP
36998263700296471hypothetical proteinBLASTP
37005073701361855hypothetical proteinBLASTP
37014103701949540hypothetical proteinBLASTP
37020253702576552hypothetical proteinBLASTP
37026123703088477Domain of unknown function DUF1863QuickGO ontologyBLASTP
370309337045411449hypothetical proteinBLASTP