Pre_GI: BLASTP Hits

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Query: NC_010501:3671517:3702612 Pseudomonas putida W619, complete genome

Start: 3702612, End: 3703088, Length: 477

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020541:2694836:270499827049982705474477Rhodanobacter sp. 2APBS1, complete genomeTIR-like domain-containing protein (DUF1863)4e-46183
NC_008322:1186000:120114612011461201628483Shewanella sp. MR-7, complete genomehypothetical protein2e-42171
NC_009901:2485965:249081424908142491299486Shewanella pealeana ATCC 700345, complete genomeDomain of unknown function DUF18631e-40165
NC_015381:2859000:290539129053912905876486Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein6e-35145
NC_015422:1694363:170384117038411704326486Alicycliphilus denitrificans K601 chromosome, complete genomehypothetical protein9e-35145
NC_017186:6817904:682977468297746830271498Amycolatopsis mediterranei S699 chromosome, complete genomehypothetical protein4e-33140
NC_014220:1670000:167756916775691678063495Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeDomain of unknown function DUF18636e-33139
NC_011992:1318691:133090813309081331393486Acidovorax ebreus TPSY, complete genomeDomain of unknown function DUF18637e-33139
NC_010803:634497:643634643634644152519Chlorobium limicola DSM 245, complete genomeDomain of unknown function DUF18634e-31133
NC_009138:1518315:152771115277111528187477Herminiimonas arsenicoxydans, complete genomehypothetical protein2e-30130
NC_009617:3263413:327058632705863271086501Clostridium beijerinckii NCIMB 8052 chromosome, complete genomehypothetical protein1e-26119
NC_004369:256262:288974288974289471498Corynebacterium efficiens YS-314, complete genomehypothetical protein4e-25113
NC_011663:5016488:503164750316475032135489Shewanella baltica OS223 chromosome, complete genomehypothetical protein1e-23108
NC_012669:1700626:171567417156741716162489Beutenbergia cavernae DSM 12333, complete genomeDomain of unknown function DUF18638e-23105
NC_008009:5044612:505822050582205058810591Acidobacteria bacterium Ellin345, complete genomehypothetical protein1e-1995.1
NC_015381:2859000:290587929058792906460582Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein8e-1372.8
NC_007498:3399478:340647634064763407075600Pelobacter carbinolicus DSM 2380, complete genomehypothetical protein6e-1063.2
NC_002927:506183:515442515442516023582Bordetella bronchiseptica RB50, complete genomehypothetical protein2e-0961.2
NC_007520:407627:422985422985423425441Thiomicrospira crunogena XCL-2, complete genomehypothetical protein2e-0858.5
NC_009138:1518315:152703715270371527633597Herminiimonas arsenicoxydans, complete genomehypothetical protein4e-0857.4