Pre_GI Gene

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Host: NC_010001 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010001:3614314 Clostridium phytofermentans ISDg, complete genome

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
36143143615204891ATPase P-type transporting HAD superfamily subfamily ICQuickGO ontologyBLASTP
36152563615507252hypothetical proteinBLASTP
36155433616220678hypothetical proteinBLASTP
36162233616636414toxin secretionphage lysis holinQuickGO ontologyBLASTP
36168653617200336hypothetical protein
36172003618192993hypothetical protein
36182043618608405hypothetical protein
36186083619150543hypothetical proteinBLASTP
361914036202191080Baseplate J family proteinQuickGO ontologyBLASTP
36202223620614393phage proteinQuickGO ontologyBLASTP
36206143620937324hypothetical proteinBLASTP
36209213621877957putative phage cell wall hydrolaseQuickGO ontologyBLASTP
36217953622733939Peptidoglycan-binding LysMQuickGO ontologyBLASTP
362274336248812139hypothetical proteinBLASTP
36250703625501432XkdN-like proteinQuickGO ontologyBLASTP
36255723626045474phage proteinQuickGO ontologyBLASTP
362606436273711308phage proteinQuickGO ontologyBLASTP
36273743627553180hypothetical proteinBLASTP
36275603627985426phage proteinQuickGO ontologyBLASTP
36279823628440459phage proteinQuickGO ontologyBLASTP
36284403628814375phage proteinQuickGO ontologyBLASTP
36288113629158348hypothetical proteinBLASTP
362917036301771008phage coat proteinQuickGO ontologyBLASTP
36301973630799603hypothetical proteinBLASTP
36309573631217261hypothetical proteinBLASTP
36313973631768372hypothetical protein
36318043632031228hypothetical proteinBLASTP
363203736335931557phage head morphogenesis protein SPP1 gp7 familyQuickGO ontologyBLASTP
363358036349681389phage portal protein SPP1 familyQuickGO ontologyBLASTP
363521936366341416phage uncharacterized proteinQuickGO ontologyBLASTP
36366243637196573hypothetical proteinBLASTP
36375373637863327hypothetical protein
36378893638503615hypothetical proteinBLASTP
3638789363886880tRNA-OTHERQuickGO ontology
36392013639698498hypothetical proteinBLASTP
36399303640382453hypothetical protein
36414213642266846hypothetical proteinBLASTP
36423283642540213hypothetical protein
36425653642954390transcriptional regulator CdaRQuickGO ontology
36431393643879741hypothetical protein
36438823644262381hypothetical protein
364445036457151266hypothetical protein
36456963645974279hypothetical protein