Pre_GI: BLASTP Hits

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Query: NC_010001:3614314:3629170 Clostridium phytofermentans ISDg, complete genome

Start: 3629170, End: 3630177, Length: 1008

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017297:2531750:254595625459562546921966Clostridium botulinum F str. 230613 chromosome, complete genomephage coat protein4e-137487
NC_012658:1810640:183391918339191834884966Clostridium botulinum Ba4 str. 657 chromosome, complete genomephage coat protein7e-136483
NC_014376:1472304:149759614975961498594999Clostridium saccharolyticum WM1 chromosome, complete genomephage coat protein4e-121434
NC_007503:1486000:149627414962741497224951Carboxydothermus hydrogenoformans Z-2901, complete genomeprophage LambdaCh01, coat protein2e-101369
NC_010516:2305110:232360523236052324552948Clostridium botulinum B1 str. Okra, complete genomeprophage LambdaCh01, coat protein3e-70265
NC_003210:2362306:2379418237941823804191002Listeria monocytogenes EGD-e, complete genomehypothetical protein1e-57223
NC_010520:2101515:212190421219042122875972Clostridium botulinum A3 str. Loch Maree, complete genomeprophage LambdaCh01, coat protein7e-42171
NC_014551:576000:600991600991601977987Bacillus amyloliquefaciens DSM 7, complete genomeSPP1 phage coat protein p0239e-27121
NC_010609:880196:9002319002319013071077Lactobacillus reuteri JCM 1112, complete genomehypothetical protein1e-25117
NC_013198:1095591:1128000112800011290131014Lactobacillus rhamnosus GG, complete genomephage protein, minor capsid protein1e-24114
NC_013517:1501276:1505603150560315066761074Sebaldella termitidis ATCC 33386, complete genomehypothetical protein2e-20100
NC_014006:850763:8638628638628648631002Sphingobium japonicum UT26S chromosome 1, complete genomehypothetical protein1e-1687.4
NC_017294:115500:1383031383031393611059Candidatus Arthromitus sp. SFB-mouse-Yit, complete genomeputative prophage Lp2 protein 401e-0964.3
NC_015913:117966:1389931389931400511059Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomephage coat protein1e-0964.3
NC_015275:986382:9950579950579963971341Clostridium lentocellum DSM 5427 chromosome, complete genomehypothetical protein7e-0755.1