Pre_GI Gene

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Host: NC_009656 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009656:1994392 Pseudomonas aeruginosa PA7 chromosome, complete genome

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Non-respiratory clinical isolate from Argentina. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
199439219954771086phosphoserine aminotransferaseQuickGO ontologyBLASTP
199547719965741098chorismate mutaseQuickGO ontologyBLASTP
199664019977491110histidinol-phosphate aminotransferaseQuickGO ontologyBLASTP
199774219999822241bifunctional cyclohexadienyl dehydrogenase 3-phosphoshikimate 1-carboxyvinyltransferaseQuickGO ontologyBLASTP
19999822000671690cytidylate kinaseQuickGO ontologyBLASTP
20009572002636168030S ribosomal protein S1QuickGO ontologyBLASTP
20027732003057285integration host factor subunit betaQuickGO ontologyBLASTP
200364720046961050O-antigen chain length regulatorQuickGO ontologyBLASTP
20049762005956981NAD-dependent epimerasedehydrataseQuickGO ontologyBLASTP
200711220082661155UDP-N-acetylglucosamine 2-epimeraseQuickGO ontologyBLASTP
20097062009819114hypothetical protein
20118182012093276hypothetical proteinBLASTP
20127822013540759flagellin modification protein AQuickGO ontologyBLASTP
201361120148761266hypothetical proteinBLASTP
201493820161671230O antigen flippaseQuickGO ontologyBLASTP
201618620174901305hypothetical proteinBLASTP
201748720186291143LPS biosynthesis protein WbpGQuickGO ontologyBLASTP
20192422020024783imidazole glycerol phosphate synthase subunit HisFQuickGO ontologyBLASTP
202005820210921035polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
202109620222171122protein WbjCQuickGO ontologyBLASTP
202220720233581152UDP-N-acetylglucosamine 2-epimeraseQuickGO ontologyBLASTP
202336820246211254glycosyltransferaseQuickGO ontologyBLASTP
20246182025574957UDP-glucose 4-epimeraseQuickGO ontologyBLASTP
202557620265951020O-antigen initiating glycosyl transferaseQuickGO ontologyBLASTP
202661520286272013nucleotide sugar epimerasedehydratase WbpMQuickGO ontologyBLASTP
20288182029141324hypothetical proteinBLASTP
202935920305551197aromatic amino acid aminotransferaseQuickGO ontologyBLASTP
203074220327542013excinuclease ABC subunit BQuickGO ontologyBLASTP
203275820343171560MFS family transporterQuickGO ontologyBLASTP
203430720353411035putative secretion proteinQuickGO ontologyBLASTP
20354442036364921putative transcriptional regulatorQuickGO ontologyBLASTP
203640220378861485glutamyl-tRNA synthetaseQuickGO ontologyBLASTP
2038378203845376tRNA-AlaQuickGO ontology
20387332039275543putative transcriptional regulatorQuickGO ontologyBLASTP