Pre_GI Gene

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Host: NC_009092 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009092:2902171 Shewanella loihica PV-4, complete genome

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
290217129041411971hypothetical proteinBLASTP
29042672904653387protein of unknown function DUF1260QuickGO ontologyBLASTP
29046862904916231RNA-binding S4 domain proteinQuickGO ontologyBLASTP
29049652905513549GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
29055182905796279PpiC-type peptidyl-prolyl cis-trans isomeraseQuickGO ontologyBLASTP
290588829077231836protein of unknown function DUF885QuickGO ontologyBLASTP
29078032908312510diguanylate cyclaseQuickGO ontologyBLASTP
290837229096191248tetratricopeptide domain proteinQuickGO ontologyBLASTP
29096222910239618TonB family proteinQuickGO ontologyBLASTP
29102412910645405Biopolymer transport protein ExbDTolRQuickGO ontologyBLASTP
29106592911186528MotATolQExbB proton channelQuickGO ontologyBLASTP
291118629125411356MotATolQExbB proton channelQuickGO ontologyBLASTP
29125412913323783hypothetical proteinBLASTP
291382629148331008Methyltransferase type 11QuickGO ontologyBLASTP
291489629175262631TonB-dependent receptorQuickGO ontologyBLASTP
291837429195851212porin Gram-negative typeQuickGO ontologyBLASTP
291981929222062388DNA polymerase B regionQuickGO ontologyBLASTP
292236929244412073helicase c2QuickGO ontologyBLASTP
29244802925253774protein of unknown function DUF81QuickGO ontologyBLASTP
29252502925912663primosomal replication protein N putativeQuickGO ontologyBLASTP
29259222926611690hypothetical proteinBLASTP
29266192927521903histone deacetylase superfamilyQuickGO ontologyBLASTP
29275732927851279hypothetical proteinBLASTP
29284132928712300competence protein ComEA helix-hairpin-helix repeat proteinQuickGO ontologyBLASTP
292910329304941392anion transporterQuickGO ontologyBLASTP