Pre_GI: BLASTP Hits

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Query: NC_009092:2902171:2904686 Shewanella loihica PV-4, complete genome

Start: 2904686, End: 2904916, Length: 231

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020260:2725201:274313327431332743345213Cronobacter sakazakii Sp291, complete genomeribosome-associated protein7e-1475.9
NC_013282:1200993:120276712027671202979213Cronobacter turicensis, complete genomeUncharacterized protein ybcJ7e-1475.9
NC_007498:3085511:308898430889843089193210Pelobacter carbinolicus DSM 2380, complete genomeputative RNA-binding protein3e-1373.9
NC_015663:2807574:281327128132712813486216Enterobacter aerogenes KCTC 2190 chromosome, complete genomeribosome-associated protein3e-1270.5
NC_020064:1150982:115527911552791155491213Serratia marcescens FGI94, complete genomehypothetical protein5e-1269.7
NC_015761:520858:523746523746523958213Salmonella bongori NCTC 12419, complete genomehypothetical protein8e-1268.9
NC_004631:2366335:238643923864392386651213Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein8e-1268.9
NC_006511:2251022:227185322718532272065213Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein8e-1268.9
NC_011147:2247460:226703722670372267249213Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein8e-1268.9
NC_016845:1285435:128686312868631287075213Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein8e-1268.9
NC_016831:2402893:242220424222042422416213Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-1167.8
NC_012947:3231893:325642432564243256636213Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein5e-1166.2
NC_011415:600375:600161600161600394234Escherichia coli SE11 chromosome, complete genomehypothetical protein5e-1166.2
NC_015567:1206727:120817412081741208386213Serratia sp. AS9 chromosome, complete genomehypothetical protein2e-1064.7
NC_015566:1206500:120798912079891208201213Serratia sp. AS12 chromosome, complete genomehypothetical protein2e-1064.7
NC_016816:3373950:338661733866173386829213Pantoea ananatis LMG 5342, complete genomehypothetical protein3e-1063.9
NC_013956:1207500:121003312100331210245213Pantoea ananatis LMG 20103 chromosome, complete genomeYbcJ3e-1063.9
NC_014837:1144500:114606611460661146278213Pantoea sp. At-9b chromosome, complete genomehypothetical protein1e-0961.6
NC_010465:3431500:344656534465653446777213Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein2e-0961.2
NC_009832:1280938:128461312846131284825213Serratia proteamaculans 568, complete genomehypothetical protein2e-0961.2
NC_012214:2805297:282317328231732823385213Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein2e-0960.8
NC_014306:1286248:129094012909401291152213Erwinia billingiae Eb661, complete genomeconserved uncharacterized protein6e-0959.7
NC_014393:1:299529953252258Clostridium cellulovorans 743B chromosome, complete genomeS4 domain-containing protein YaaA2e-0858.2
NC_014562:469154:473130473130473342213Pantoea vagans C9-1 chromosome, complete genomeUncharacterized protein ybcJ2e-0857.8
NC_008836:2780339:280435428043542804575222Burkholderia mallei NCTC 10229 chromosome II, complete sequencehypothetical protein3e-0857
NC_001263:1378605:139623013962301396544315Deinococcus radiodurans R1 chromosome 1, complete sequencehypothetical protein4e-0753.5
NC_013016:354000:377039377039377272234Neisseria meningitidis alpha14 chromosome, complete genomeputative RNA-binding protein4e-0753.5
NC_013192:2434664:273227322959228Leptotrichia buccalis DSM 1135, complete genomeS4 domain protein YaaA4e-0753.1
NC_009089:1:280528053011207Clostridium difficile 630, complete genomeputative RNA-binding mediating protein9e-0752.4
NC_010001:1:309930993314216Clostridium phytofermentans ISDg, complete genomeRNA-binding S4 domain protein2e-0651.6
NC_014973:4630132:464848946484894648686198Geobacter sp. M18 chromosome, complete genomeRNA-binding S4 domain-containing protein2e-0651.2
NC_008593:2527064:254454325445432544749207Clostridium novyi NT, complete genomeS4 domain protein2e-0650.8
NC_015275:1:282728273033207Clostridium lentocellum DSM 5427 chromosome, complete genomeRNA-binding S4 domain protein2e-0650.8
NC_010814:155834:164012164012164230219Geobacter lovleyi SZ, complete genomeS4 domain protein YaaA6e-0649.7