Pre_GI: BLASTP Hits

Some Help

Query: NC_009092:2902171:2908372 Shewanella loihica PV-4, complete genome

Start: 2908372, End: 2909619, Length: 1248

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008577:3125675:3126236312623631274831248Shewanella sp. ANA-3 chromosome 1, complete sequenceTPR repeat-containing protein2e-172605
NC_008321:2922000:2922598292259829238451248Shewanella sp. MR-4, complete genomeTPR repeat-containing protein3e-172604
NC_008322:2983951:2986422298642229876691248Shewanella sp. MR-7, complete genomeTPR repeat-containing protein4e-172604
NC_011663:3181579:3181579318157931828261248Shewanella baltica OS223 chromosome, complete genomehypothetical protein3e-170598
NC_014541:1280835:1299277129927713005331257Ferrimonas balearica DSM 9799 chromosome, complete genomeTPR repeat protein4e-96352
NC_008228:3608909:3608909360890936101681260Pseudoalteromonas atlantica T6c, complete genomeTPR repeat8e-83307
NC_014315:2659479:2676365267636526776391275Nitrosococcus watsoni C-113 chromosome, complete genomeTPR repeat-containing protein2e-1894
NC_010943:9294:92949294104811188Stenotrophomonas maltophilia K279a, complete genomeconserved hypothetical TPR repeat family protein8e-1168.6
NC_004556:1:90469046102391194Xylella fastidiosa Temecula1, complete genomehypothetical protein5e-0962.8
NC_010577:1:89378937101301194Xylella fastidiosa M23, complete genomeTetratricopeptide TPR_2 repeat protein5e-0962.8
NC_002488:1:90669066102591194Xylella fastidiosa 9a5c, complete genomehypothetical protein7e-0962.4