Pre_GI Gene

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Host: NC_008563 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008563:318993 Escherichia coli APEC O1, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (serovar O1) is an avian pathogenic strain and causes respiratory, blood, and enteric infections primarily in poultry. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
3173603190031644hypothetical proteinBLASTP
3189933215182526hypothetical protein YagX precursorQuickGO ontologyBLASTP
321544322260717Hypothetical protein yagY precursorQuickGO ontologyBLASTP
322269322856588Hypothetical protein yagZ precursorQuickGO ontologyBLASTP
322930323520591hypothetical proteinBLASTP
323944324234291hypothetical proteinBLASTP
32469632496226750S ribosomal protein L31 type B-1QuickGO ontologyBLASTP
3258993270411143putative NADH-dependent flavin oxidoreductaseQuickGO ontologyBLASTP
327213328133921hypothetical proteinBLASTP
328227329216990putative LysR-like transcriptional regulatorQuickGO ontologyBLASTP
329341330309969putative transcriptional regulatorQuickGO ontologyBLASTP
330340331329990putative aldoketo reductaseQuickGO ontologyBLASTP
33135633220785225-diketo-D-gluconic acid reductase AQuickGO ontologyBLASTP
3327733370234251attaching and effacing protein pathogenesis factor EaeHQuickGO ontologyBLASTP
337148338038891putative transcriptional regulatorQuickGO ontologyBLASTP
33823833912288525-diketo-D-gluconic acid reductase AQuickGO ontologyBLASTP
339282339884603hypothetical proteinBLASTP
3402323415841353putative pyridine nucleotide-disulfide oxidoreductase ykgCQuickGO ontologyBLASTP
341784342638855putative DNA-binding transcriptional regulatorQuickGO ontologyBLASTP
343165343884720hypothetical proteinBLASTP
3440223453231302hypothetical proteinBLASTP
345163346011849hypothetical proteinBLASTP
346254346922669hypothetical proteinBLASTP
3471063494182313hypothetical proteinBLASTP
349445350206762hypothetical proteinBLASTP
350360351154795hypothetical proteinBLASTP
351484352086603hypothetical proteinBLASTP
352811353092282hypothetical proteinBLASTP
3531173547211605choline dehydrogenaseQuickGO ontologyBLASTP
3548193562941476betaine aldehyde dehydrogenase NAD-dependentQuickGO ontologyBLASTP
356305356901597regulatory protein BetIQuickGO ontologyBLASTP
3570213590542034high-affinity choline transport proteinQuickGO ontologyBLASTP
3599263610201095putative DNA-binding transcriptional regulatorQuickGO ontologyBLASTP
361062361994933putative DNA-bindng transcriptional regulatorQuickGO ontologyBLASTP
362086362583498hypothetical protein