Pre_GI Gene

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Host: NC_008543 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008543:582129 Burkholderia cenocepacia HI2424 chromosome 2, complete sequence

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
582129582593465hypothetical proteinBLASTP
5827015840561356polyhydroxyalkanoate depolymerase intracellularQuickGO ontologyBLASTP
584287585006720Glutathione S-transferase N-terminal domainQuickGO ontologyBLASTP
5852485864981251cyclic nucleotide-binding proteinQuickGO ontologyBLASTP
586513587277765MotATolQExbB proton channelQuickGO ontologyBLASTP
587351588022672OmpAMotB domain proteinQuickGO ontologyBLASTP
5881955900571863methyl-accepting chemotaxis sensory transducerQuickGO ontologyBLASTP
5907625920091248response regulator receiver proteinQuickGO ontologyBLASTP
592011592463453response regulator receiver proteinQuickGO ontologyBLASTP
5924605958823423hypothetical proteinBLASTP
596452596748297hypothetical proteinBLASTP
5969555981961242amidohydrolaseQuickGO ontologyBLASTP
5982095995251317major facilitator superfamily MFS_1QuickGO ontologyBLASTP
599658600569912transcriptional regulator LysR familyQuickGO ontologyBLASTP
600712601173462hypothetical proteinBLASTP
601218601340123hypothetical proteinBLASTP
6017136042652553Rhs element Vgr proteinQuickGO ontologyBLASTP
604276605079804hypothetical proteinBLASTP
6051106076862577hypothetical proteinBLASTP
607699608667969hypothetical proteinBLASTP
608664608948285hypothetical proteinBLASTP
6097956110451251transposase mutator typeQuickGO ontologyBLASTP