Pre_GI: BLASTN Hits

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Query: NC_008543:582129 Burkholderia cenocepacia HI2424 chromosome 2, complete sequence

Start: 582129, End: 611045, Length: 28917

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008061:18642821864282188910424823Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence037530BLASTN svgBLASTP svg
NC_010515:67800067800069562617627Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence015850BLASTN svgBLASTP svg
NC_012856:737170*73717079740260233Ralstonia pickettii 12D chromosome 1, complete genome01066BLASTN svgBLASTP svg
NC_010551:20079262007926203080722882Burkholderia ambifaria MC40-6 chromosome 1, complete sequence01053BLASTN svgBLASTP svg
NC_012856:112296322963Ralstonia pickettii 12D chromosome 1, complete genome01045BLASTN svgBLASTP svg
NC_003295:27173627173629326221527Ralstonia solanacearum GMI1000, complete genome01013BLASTN svgBLASTP svg
NC_003296:55683655683661181954984Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete01013BLASTN svgBLASTP svg
NC_007973:49960649960652396824363Ralstonia metallidurans CH34 chromosome 1, complete sequence0981BLASTN svgBLASTP svg
NC_015382:17221317221319334021128Burkholderia gladioli BSR3 plasmid bgla_1p, complete sequence0821BLASTN svgBLASTP svg
NC_007651:3560652*3560652359749336842Burkholderia thailandensis E264 chromosome I, complete sequence1e-119438BLASTN svgBLASTP svg
NC_007651:2639553*2639553269172452172Burkholderia thailandensis E264 chromosome I, complete sequence3e-117430BLASTN svgBLASTP svg
NC_015563:3979500*3979500400273623237Delftia sp. Cs1-4 chromosome, complete genome1e-110408BLASTN svgBLASTP svg
NC_015563:35119513511951354146929519Delftia sp. Cs1-4 chromosome, complete genome1e-110408BLASTN svgBLASTP svg
NC_010529:29650029650034723950740Cupriavidus taiwanensis plasmid pRALTA, complete sequence1e-107398BLASTN svgBLASTP svg
NC_009140:121107*12110714459223486Salmonella enterica enterica sv Newport str. SL254, complete1e-95359BLASTN svgBLASTP svg
NC_007347:24219422421942244414322202Ralstonia eutropha JMP134 chromosome 1, complete sequence4e-95357BLASTN svgBLASTP svg
NC_008543:12767512767515311825444Burkholderia cenocepacia HI2424 chromosome 2, complete sequence1e-85325BLASTN svgBLASTP svg
NC_008061:21068482106848213789431047Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence1e-85325BLASTN svgBLASTP svg
NC_007953:31487231487234061825747Burkholderia xenovorans LB400 chromosome 3, complete sequence1e-76295BLASTN svgBLASTP svg
NC_010512:110932*11093213790426973Burkholderia cenocepacia MC0-3 chromosome 3, complete sequence3e-59238BLASTN svgBLASTP svg
NC_010512:86693286693289209925168Burkholderia cenocepacia MC0-3 chromosome 3, complete sequence3e-59238BLASTN svgBLASTP svg
NC_010087:376918*37691844748870571Burkholderia multivorans ATCC 17616 chromosome 3, complete1e-55226BLASTN svgBLASTP svg
NC_010086:1907959*1907959194027532317Burkholderia multivorans ATCC 17616 chromosome 2, complete1e-55226BLASTN svgBLASTP svg
NC_010804:25186952518695254148822794Burkholderia multivorans ATCC 17616 chromosome 1, complete1e-52216BLASTN svgBLASTP svg
NC_010508:19806891980689200677326085Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence4e-52214BLASTN svgBLASTP svg
NC_010805:530876*53087656144030565Burkholderia multivorans ATCC 17616 chromosome 2, complete6e-51210BLASTN svgBLASTP svg
NC_010805:57570957570964147565767Burkholderia multivorans ATCC 17616 chromosome 2, complete6e-51210BLASTN svgBLASTP svg
NC_010086:18163781816378188976873391Burkholderia multivorans ATCC 17616 chromosome 2, complete6e-51210BLASTN svgBLASTP svg
NC_010002:2518599*2518599254275024152Delftia acidovorans SPH-1, complete genome4e-46194BLASTN svgBLASTP svg
NC_009075:15017150174611331097Burkholderia pseudomallei 668 chromosome II, complete sequence3e-43184BLASTN svgBLASTP svg
NC_008543:26668462666846268814221297Burkholderia cenocepacia HI2424 chromosome 2, complete sequence2e-38168BLASTN svgBLASTP svg
NC_008061:25820002582000260842826429Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence2e-38168BLASTN svgBLASTP svg
NC_007650:42074542074544753126787Burkholderia thailandensis E264 chromosome II, complete sequence3e-37165BLASTN svgBLASTP svg
NC_007651:3064530*30645303173670109141Burkholderia thailandensis E264 chromosome I, complete sequence3e-37165BLASTN svgBLASTP svg
NC_007651:3719191*3719191374181722627Burkholderia thailandensis E264 chromosome I, complete sequence3e-37165BLASTN svgBLASTP svg
NC_007953:14347051434705145812223418Burkholderia xenovorans LB400 chromosome 3, complete sequence1e-36163BLASTN svgBLASTP svg
NC_012721:979656979656100222522570Burkholderia glumae BGR1 chromosome 2, complete genome2e-35159BLASTN svgBLASTP svg
NC_010551:41548741548744051025024Burkholderia ambifaria MC40-6 chromosome 1, complete sequence7e-32147BLASTN svgBLASTP svg
NC_007953:35349635349637159918104Burkholderia xenovorans LB400 chromosome 3, complete sequence7e-32147BLASTN svgBLASTP svg
NC_014924:2840310*2840310286007019761Pseudoxanthomonas suwonensis 11-1 chromosome, complete genome7e-26127BLASTN svgBLASTP svg
NC_007275:112112521125Pseudomonas syringae pv. phaseolicola 1448A small plasmid, complete4e-24121BLASTN svgBLASTP svg
NC_005773:5310339*5310339533285822520Pseudomonas syringae pv. phaseolicola 1448A, complete genome4e-24121BLASTN svgBLASTP svg
NC_005773:32205003220500325277732278Pseudomonas syringae pv. phaseolicola 1448A, complete genome4e-24121BLASTN svgBLASTP svg
NC_005773:21771842177184220009922916Pseudomonas syringae pv. phaseolicola 1448A, complete genome4e-24121BLASTN svgBLASTP svg
NC_005773:1851116*1851116187559924484Pseudomonas syringae pv. phaseolicola 1448A, complete genome4e-24121BLASTN svgBLASTP svg
NC_008390:40731540731543675629442Burkholderia cepacia AMMD chromosome 1, complete sequence2e-23119BLASTN svgBLASTP svg
NC_009074:3409849*3409849344201632168Burkholderia pseudomallei 668 chromosome I, complete sequence3e-22115BLASTN svgBLASTP svg
NC_005773:57347335734733576109926367Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-22115BLASTN svgBLASTP svg
NC_010172:4185904*4185904422075034847Methylobacterium extorquens PA1, complete genome1e-21113BLASTN svgBLASTP svg
NC_005773:38514333851433386927817846Pseudomonas syringae pv. phaseolicola 1448A, complete genome1e-21113BLASTN svgBLASTP svg
NC_005773:16757931675793169861222820Pseudomonas syringae pv. phaseolicola 1448A, complete genome4e-21111BLASTN svgBLASTP svg
NC_005773:4028500*4028500405209923600Pseudomonas syringae pv. phaseolicola 1448A, complete genome4e-21111BLASTN svgBLASTP svg
NC_010552:24547762454776248709932324Burkholderia ambifaria MC40-6 chromosome 2, complete sequence4e-21111BLASTN svgBLASTP svg
NC_005773:4539751*4539751456760327853Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-19105BLASTN svgBLASTP svg
NC_005773:106000*10600015088044881Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-19105BLASTN svgBLASTP svg
NC_012214:20190002019000204685227853Erwinia pyrifoliae Ep1/96, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_012808:4235567*4235567425812622560Methylobacterium extorquens AM1, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_008782:28578992857899289359935701Acidovorax sp. JS42, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_012880:1765920*1765920184383077911Dickeya dadantii Ech703, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_013592:1668092*1668092170683538744Dickeya dadantii Ech586, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_015684:362236*36223640024938014Oligotropha carboxidovorans OM5 chromosome, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_014121:20906302090630212903438405Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete4e-1281.8BLASTN svgBLASTP svg
NC_007650:722961*72296174620423244Burkholderia thailandensis E264 chromosome II, complete sequence1e-1179.8BLASTN svgBLASTP svg
NC_005773:17688517688520456427680Pseudomonas syringae pv. phaseolicola 1448A, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008781:28839682883968290914025173Polaromonas naphthalenivorans CJ2, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_008061:27736702773670279999926330Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_010067:1300606*1300606132180421199Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete2e-1075.8BLASTN svgBLASTP svg
NC_013282:1804909*1804909182709922191Cronobacter turicensis, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_012721:24000024000026711727118Burkholderia glumae BGR1 chromosome 2, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_012721:10950010950012980920310Burkholderia glumae BGR1 chromosome 2, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_010515:16784871678487173009951613Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence9e-1073.8BLASTN svgBLASTP svg
NC_004460:12371291237129126309925971Vibrio vulnificus CMCP6 chromosome II, complete sequence4e-0971.9BLASTN svgBLASTP svg
NC_013508:35930003593000361400721008Edwardsiella tarda EIB202, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_015376:17528831752883177658023698Burkholderia gladioli BSR3 chromosome chromosome 2, complete1e-0869.9BLASTN svgBLASTP svg
NC_010515:19009671900967192454423578Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_003295:3688000*3688000372599938000Ralstonia solanacearum GMI1000, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_008060:1182378*1182378120591323536Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence6e-0867.9BLASTN svgBLASTP svg
NC_010676:26584952658495270919750703Burkholderia phytofirmans PsJN chromosome 2, complete sequence6e-0867.9BLASTN svgBLASTP svg
NC_012724:24435002443500246405820559Burkholderia glumae BGR1 chromosome 1, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_012917:23627252362725238725724533Pectobacterium carotovorum subsp. carotovorum PC1, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_013592:1730505*1730505176316532661Dickeya dadantii Ech586, complete genome6e-0867.9BLASTN svgBLASTP svg
AP010958:3853082*3853082389809945018Escherichia coli O103:H2 str. 12009 DNA, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008060:2913671*2913671294708933419Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_008542:483761*48376151469930939Burkholderia cenocepacia HI2424 chromosome 1, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_014500:31752833175283321401838736Dickeya dadantii 3937 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007434:19230001923000195531232313Burkholderia pseudomallei 1710b chromosome I, complete sequence9e-0763.9BLASTN svgBLASTP svg
NC_007493:1929000*1929000195414225143Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence9e-0763.9BLASTN svgBLASTP svg
NC_010170:11521311152131117669424564Bordetella petrii, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_012917:1923059*1923059194769524637Pectobacterium carotovorum subsp. carotovorum PC1, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_013421:4714478*4714478478002665549Pectobacterium wasabiae WPP163, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_014306:49013904901390494640145012Erwinia billingiae Eb661, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_014323:3292082*3292082331943527354Herbaspirillum seropedicae SmR1 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_014718:79152879152881681725290Burkholderia rhizoxinica HKI 454 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_009077:16873041687304172055433251Mycobacterium sp. JLS, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010002:39808323980832399913918308Delftia acidovorans SPH-1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010508:451184*45118447649825315Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_013282:18424121842412187000127590Cronobacter turicensis, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013757:38974133897413393181534403Geodermatophilus obscurus DSM 43160, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014323:39763513976351403850962159Herbaspirillum seropedicae SmR1 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014814:13240413240415486122458Mycobacterium sp. Spyr1 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008146:17480261748026180688658861Mycobacterium sp. MCS, complete genome3e-0661.9BLASTN svgBLASTP svg