Pre_GI Gene

Some Help

Host: NC_008542 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008542:1021848 Burkholderia cenocepacia HI2424 chromosome 1, complete sequence

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
10218481022504657protein-L-isoaspartateD-aspartate O-methyltransferaseQuickGO ontologyBLASTP
10226091022866258hypothetical proteinBLASTP
102296210243531392oxygen-independent coproporphyrinogen III oxidaseQuickGO ontologyBLASTP
10245271024844318protein of unknown function UPF0153QuickGO ontologyBLASTP
10248411025422582hypothetical proteinBLASTP
10255021026332831putative undecaprenol kinaseQuickGO ontologyBLASTP
10264301027197768tRNA guanine-N7--methyltransferaseQuickGO ontologyBLASTP
10275201027801282hypothetical protein
10288471029791945Cobyrinic acid ac-diamide synthaseQuickGO ontologyBLASTP
10300311030429399transcriptional regulator XRE familyQuickGO ontologyBLASTP
10306051031084480hypothetical proteinBLASTP
10311381031488351hypothetical proteinBLASTP
10315201031846327hypothetical proteinBLASTP
10320691032926858hypothetical proteinBLASTP
103295410340991146phage integrase family proteinQuickGO ontologyBLASTP
103422710364672241phageplasmid primase P4 familyQuickGO ontologyBLASTP
10365491036917369hypothetical proteinBLASTP
10381951038503309hypothetical proteinBLASTP
10385641038866303hypothetical proteinBLASTP
10389371039659723hypothetical proteinBLASTP
10406691041013345protein of unknown function DUF861 cupin_3QuickGO ontologyBLASTP
104135010425161167mandelate racemasemuconate lactonizing enzymeQuickGO ontologyBLASTP
10425201043146627Lysine exporter protein LYSEYGGAQuickGO ontologyBLASTP
10432241044144921transcriptional regulator LysR familyQuickGO ontologyBLASTP
104433710456591323major facilitator superfamily MFS_1QuickGO ontologyBLASTP
104572210469451224Formyl-CoA transferaseQuickGO ontologyBLASTP
10469421047751810Enoyl-CoA hydrataseisomeraseQuickGO ontologyBLASTP
10477921048334543Chromate transporterQuickGO ontologyBLASTP
10483311048942612Chromate transporterQuickGO ontologyBLASTP
10490741049829756transcriptional regulator DeoR familyQuickGO ontologyBLASTP
10499111050510600Nucleoside diphosphate pyrophosphataseQuickGO ontologyBLASTP
10505071050884378hypothetical proteinBLASTP