Pre_GI Gene

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Host: NC_008268 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008268:3162824 Rhodococcus sp. RHA1, complete genome

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
31628243163723900hypothetical proteinBLASTP
316372031648051086possible oxidoreductaseQuickGO ontologyBLASTP
316499631666031608probable transcriptional regulator IclR familyQuickGO ontologyBLASTP
316686131679371077maleylacetate reductaseQuickGO ontologyBLASTP
31679953168951957probable catechol 12-dioxygenaseQuickGO ontologyBLASTP
316905131704871437sugar transporter MFS superfamilyQuickGO ontologyBLASTP
31705253170890366universal stress proteinQuickGO ontologyBLASTP
31709373171371435hypothetical proteinBLASTP
317162431728561233possible transposaseQuickGO ontologyBLASTP
317353731754171881possible transposaseQuickGO ontologyBLASTP
31755143176080567hypothetical proteinBLASTP
31762333176490258hypothetical proteinBLASTP
317665231778391188probable sterol carrier proteinQuickGO ontologyBLASTP
31778413178296456hypothetical proteinBLASTP
31782933178673381possible MaoC-like dehydrataseQuickGO ontologyBLASTP
317870531795088043-oxoacyl-acyl-carrier-protein reductaseQuickGO ontologyBLASTP
317953131810781548probable AMP-binding acyl-CoA synthetaseQuickGO ontologyBLASTP
318109431822901197probable transcriptional regulatorQuickGO ontologyBLASTP
318229131838981608sodium symporter ABC superfamilyQuickGO ontologyBLASTP
31840023184892891hypothetical proteinBLASTP
318488931867121824gamma-aminobutyrate transporter APC familyQuickGO ontologyBLASTP
31870173187271255hypothetical protein