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Query: NC_008268:3162824 Rhodococcus sp. RHA1, complete genome

Start: 3162824, End: 3187271, Length: 24448

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008268:71806637180663722188141219Rhodococcus sp. RHA1, complete genome2e-90341BLASTN svgBLASTP svg
NC_012522:985679856712209923533Rhodococcus opacus B4, complete genome2e-59238BLASTN svgBLASTP svg
NC_013757:38974133897413393181534403Geodermatophilus obscurus DSM 43160, complete genome9e-28133BLASTN svgBLASTP svg
NC_007511:30808493080849309968718839Burkholderia sp. 383 chromosome 2, complete sequence2e-1385.7BLASTN svgBLASTP svg
NC_008313:2685531*2685531270846622936Ralstonia eutropha H16 chromosome 1, complete sequence8e-1073.8BLASTN svgBLASTP svg
NC_003888:2814360*2814360285868544326Streptomyces coelicolor A3(2), complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008726:47253894725389475038925001Mycobacterium vanbaalenii PYR-1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013510:888542*88854291609927558Thermomonospora curvata DSM 43183, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008596:4104476*4104476413983135356Mycobacterium smegmatis str. MC2 155, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008391:22531882253188227809924912Burkholderia cepacia AMMD chromosome 2, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_021177:2451000*2451000247327922280Streptomyces fulvissimus DSM 40593, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015952:17170717170719799926293Streptomyces violaceusniger Tu 4113 plasmid pSTRVI02, complete3e-0661.9BLASTN svgBLASTP svg
NC_010552:29370329370332259928897Burkholderia ambifaria MC40-6 chromosome 2, complete sequence3e-0661.9BLASTN svgBLASTP svg