Pre_GI Gene

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Host: NC_008148 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008148:2290806 Rubrobacter xylanophilus DSM 9941, complete genome

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
229080622924371632AMP-dependent synthetase and ligaseQuickGO ontologyBLASTP
22924372292835399Endoribonuclease L-PSPQuickGO ontologyBLASTP
22932502293594345hypothetical proteinBLASTP
2293628229370073tRNA-AlaQuickGO ontology
229394722958871941serinethreonine protein kinaseQuickGO ontologyBLASTP
22959382296043106
22961582296397240hypothetical protein
22967632297092330hypothetical protein
22972142297471258hypothetical protein
229766422993941731transposase IS4QuickGO ontologyBLASTP
229951923006571139BLASTP
23021462302580435hypothetical protein
23031022303962861lipase class 2QuickGO ontologyBLASTP
2304069230414173tRNA-ArgQuickGO ontology
23042452305006762metallophosphoesteraseQuickGO ontologyBLASTP
23050122305452441D-tyrosyl-tRNATyr deacylaseQuickGO ontologyBLASTP
23054492306252804Methyltransferase type 11QuickGO ontology
230630223081431842ABC transporter relatedQuickGO ontologyBLASTP
2308212230828574tRNA-ProQuickGO ontology
230832123093971077cell wall hydrolaseautolysinQuickGO ontologyBLASTP
23095262309792267chaperonin Cpn10QuickGO ontologyBLASTP
23098992310210312thioredoxinQuickGO ontologyBLASTP
231028123112409601-phosphofructokinaseQuickGO ontologyBLASTP
231124523123991155Serine-type D-Ala-D-Ala carboxypeptidaseQuickGO ontologyBLASTP
23125042313025522RedoxinQuickGO ontology
23131852314027843Orotidine 5-phosphate decarboxylase subfamily 2QuickGO ontologyBLASTP
23141092314381273histone-like DNA-binding proteinQuickGO ontologyBLASTP
23144762315012537orotate phosphoribosyltransferaseQuickGO ontologyBLASTP
23149992315454456hypothetical protein
23155272315787261protein of unknown function DUF156QuickGO ontology
231576023172981539UDP-N-acetylmuramyl-tripeptide synthetasesQuickGO ontologyBLASTP