Pre_GI Gene

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Host: NC_008146 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008146:861319 Mycobacterium sp. MCS, complete genome

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
8613198634632145hypothetical proteinBLASTP
8634578645301074hypothetical proteinBLASTP
864600865529930alphabeta hydrolase foldQuickGO ontologyBLASTP
865640865897258hypothetical proteinBLASTP
8663678727446378conserved hypothetical protein putative DNA helicaseQuickGO ontologyBLASTP
872764873618855hypothetical proteinBLASTP
8738378772083372hypothetical proteinBLASTP
8772058818364632DEADDEAH box helicase-like proteinQuickGO ontologyBLASTP
8820778831021026hypothetical proteinBLASTP
883249883983735hypothetical proteinBLASTP
8839808862442265protein of unknown function DUF262QuickGO ontologyBLASTP
8862418883522112UvrDREP helicaseQuickGO ontologyBLASTP
8887568923613606helicase-like proteinQuickGO ontologyBLASTP
8923588963774020hypothetical proteinBLASTP
8963749000363663helicase-like proteinQuickGO ontologyBLASTP
9000879021022016hypothetical proteinBLASTP
902138902815678hypothetical proteinBLASTP
902871903719849hypothetical proteinBLASTP
9037169048731158DNA-cytosine methyltransferaseQuickGO ontologyBLASTP
904987905388402DNA mismatch endonuclease vsrQuickGO ontologyBLASTP
905489905938450hypothetical proteinBLASTP
9061149074511338hypothetical proteinBLASTP
907834908229396hypothetical proteinBLASTP
908262909218957hypothetical proteinBLASTP
9097259118452121hypothetical proteinBLASTP
912176912610435PilT protein-like proteinQuickGO ontologyBLASTP
9131299143071179hypothetical proteinBLASTP
9144129161031692hypothetical proteinBLASTP
9161409172251086hypothetical proteinBLASTP
9172229190511830ATPase associated with various cellular activities AAA_5QuickGO ontologyBLASTP
919428920039612hypothetical proteinBLASTP
9202279223232097ADP-ribosylationCrystallin J1QuickGO ontologyBLASTP
922395923048654NUDIX hydrolaseQuickGO ontologyBLASTP
923050923598549transcriptional regulator TetR familyQuickGO ontologyBLASTP
923714924460747short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
924739925047309Death-on-curing proteinQuickGO ontologyBLASTP
9251489263951248transposase mutator typeQuickGO ontologyBLASTP
927480927782303hypothetical proteinBLASTP
927872928204333hypothetical proteinBLASTP
9290439303621320transposase mutator typeQuickGO ontologyBLASTP
930458930712255hypothetical proteinBLASTP
9308249320111188hypothetical proteinBLASTP
932051932299249phage-related major capsid proteinQuickGO ontologyBLASTP
933289933624336transposase IS3IS911QuickGO ontologyBLASTP
9337229349241203hypothetical proteinBLASTP
935003935986984MscS Mechanosensitive ion channelQuickGO ontologyBLASTP
936056936925870hypothetical proteinBLASTP
9370619385031443hypothetical proteinBLASTP
9385319399581428peptidase S1 and S6 chymotrypsinHapQuickGO ontologyBLASTP
9402629415511290hypothetical proteinBLASTP
941924942337414hypothetical proteinBLASTP
942390943271882protein of unknown function DUF6 transmembraneQuickGO ontologyBLASTP
943271944146876short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP