Pre_GI: BLASTP Hits

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Query: NC_008146:861319:922395 Mycobacterium sp. MCS, complete genome

Start: 922395, End: 923048, Length: 654

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008705:868623:931124931124931777654Mycobacterium sp. KMS, complete genomeNUDIX hydrolase7e-120429
NC_017955:4075804:4088990408899040900841095Modestobacter marinus, complete genomeNUDIX hydrolase6e-40163
NC_008095:8772893:877578687757868776475690Myxococcus xanthus DK 1622, complete genomehydrolase, NUDIX family4e-1787.8
NC_013440:8717500:873205987320598732748690Haliangium ochraceum DSM 14365, complete genomeNUDIX hydrolase5e-1787.8
NC_011884:1998559:201802520180252018714690Cyanothece sp. PCC 7425, complete genomeNUDIX hydrolase2e-1686.3
NC_013406:7024149:704634070463407047224885Paenibacillus sp. Y412MC10 chromosome, complete genomeNUDIX hydrolase2e-1685.9
NC_015572:65597:833358333584147813Methylomonas methanica MC09 chromosome, complete genomeNUDIX hydrolase8e-1684
NC_005085:24623:400464004640807762Chromobacterium violaceum ATCC 12472, complete genomeprobable MutT/nudix family protein1e-1583.2
NC_008025:1588348:160423516042351604912678Deinococcus geothermalis DSM 11300, complete genomeNUDIX hydrolase3e-1582
NC_005966:923008:948144948144948896753Acinetobacter sp. ADP1, complete genomeconserved hypothetical protein; putative MutT/nudix family protein1e-1479.7
NC_012811:959725:975383975383976081699Methylobacterium extorquens AM1 megaplasmid, complete sequencehypothetical protein1e-1479.7
NC_013595:8338619:835783483578348358547714Streptosporangium roseum DSM 43021, complete genomeNUDIX hydrolase2e-1375.9
NC_007777:1296000:131113113111311311880750Frankia sp. CcI3, complete genomeNUDIX hydrolase1e-1273.2
NC_009380:4944183:494560249456024946342741Salinispora tropica CNB-440 chromosome, complete genomeNUDIX hydrolase1e-1169.7
NC_009953:2342500:235882923588292359557729Salinispora arenicola CNS-205 chromosome, complete genomeNUDIX hydrolase2e-1168.9
NC_011662:386162:390433390433391191759Thauera sp. MZ1T, complete genomeNUDIX hydrolase6e-1167.8
NC_006361:4574536:458319845831984583914717Nocardia farcinica IFM 10152, complete genomehypothetical protein6e-1167.4
NC_008571:744500:758329758329759018690Gramella forsetii KT0803, complete genomeNUDIX family hydrolase3e-1065.5
NC_009142:1242850:125666312566631257136474Saccharopolyspora erythraea NRRL 2338, complete genomeDNA hydrolase with MutT domain9e-1063.5
NC_016627:1133759:114851711485171149431915Clostridium clariflavum DSM 19732 chromosome, complete genomeADP-ribose pyrophosphatase1e-0963.2
NC_004193:375416:408511408511409326816Oceanobacillus iheyensis HTE831, complete genomeMutT/nudix family protein5e-0961.2
NC_010794:2157920:217713521771352177677543Methylacidiphilum infernorum V4, complete genomeNUDIX family hydrolase5e-0961.2
NC_012660:2684981:269040126904012691093693Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein6e-0857.8
NC_008269:577111:593371593371594018648Rhodococcus sp. RHA1 plasmid pRHL1, complete sequencepossible DNA hydrolase9e-0857
NC_009662:1285826:130366013036601304112453Nitratiruptor sp. SB155-2, complete genomeNUDIX hydrolase3e-0755.1