Pre_GI Gene

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Host: NC_007912 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007912:1111093 Saccharophagus degradans 2-40, complete genome

Host Lineage: Saccharophagus degradans; Saccharophagus; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is a marine gamma-proteobacterium that was isolated from decaying Spartina alterniflora, a salt marsh cord grass, in the Chesapeake Bay, USA. Saccharophagus degradans 2-40 has been used to produce ethanol from plant material and may be useful for the production bioethanol. Bacterium able to degrade complex carbohydrates. Saccharophagus degradans is capable of degrading insoluble complex carbohydrates through the collective action of enzyme complexes found on its cell surfaces, utilizing the degradation products as a carbon source. This organism may be useful in bioremediation. The degradative enzymes this organism produces are typically exoenzymes that are collected and organized into large surface complexes termed cellulosomes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
111109311138462754TonB-dependent receptorQuickGO ontologyBLASTP
111387411150941221Glutamate N-acetyltransferaseQuickGO ontologyBLASTP
11151111116064954MutTnudix family proteinthiamine-phosphate pyrophosphorylase putativeQuickGO ontologyBLASTP
11160611116273213diguanylate cyclasephosphodiesterase GGDEF EAL domainsQuickGO ontologyBLASTP
11162781116889612Phosphoribosylglycinamide formyltransferaseQuickGO ontologyBLASTP
11168891117785897Phosphoribosylformylglycinamidine cyclo-ligaseQuickGO ontologyBLASTP
111778811190051218type IV pilus biogenesis protein PilCQuickGO ontologyBLASTP
111900911207301722type 4 fimbrial biogenesis protein PilBQuickGO ontologyBLASTP
11210891121508420Peptidase S49 protease IVQuickGO ontologyBLASTP
112205311235041452hypothetical proteinBLASTP
11234811124188708hypothetical protein
11243311124870540Arsenate reductaseQuickGO ontologyBLASTP
11249091125865957Ribonuclease BNQuickGO ontologyBLASTP
112588211270031122response regulator receiver domain protein CheY-likeQuickGO ontologyBLASTP
11270161127714699hypothetical proteinBLASTP
11278101128379570Carbohydrate kinase thermoresistant glucokinaseQuickGO ontologyBLASTP
11283761129332957regulatory protein LacIQuickGO ontologyBLASTP
112945311311951743hypothetical proteinBLASTP
11312501132137888Sodiumgalactoside symporterQuickGO ontologyBLASTP
113228311348112529hypothetical proteinBLASTP
11351671135766600Prolyl-tRNA synthetaseQuickGO ontologyBLASTP
11357691136614846signaling modulator of AmpD AmpEQuickGO ontologyBLASTP
11369861137735750Histone-like DNA-binding proteinQuickGO ontologyBLASTP
113776411393501587hypothetical proteinBLASTP