Pre_GI: BLASTP Hits

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Query: NC_007912:1111093:1135167 Saccharophagus degradans 2-40, complete genome

Start: 1135167, End: 1135766, Length: 600

Host Lineage: Saccharophagus degradans; Saccharophagus; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is a marine gamma-proteobacterium that was isolated from decaying Spartina alterniflora, a salt marsh cord grass, in the Chesapeake Bay, USA. Saccharophagus degradans 2-40 has been used to produce ethanol from plant material and may be useful for the production bioethanol. Bacterium able to degrade complex carbohydrates. Saccharophagus degradans is capable of degrading insoluble complex carbohydrates through the collective action of enzyme complexes found on its cell surfaces, utilizing the degradation products as a carbon source. This organism may be useful in bioremediation. The degradative enzymes this organism produces are typically exoenzymes that are collected and organized into large surface complexes termed cellulosomes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018080:5070687:507373150737315074297567Pseudomonas aeruginosa DK2 chromosome, complete genomeN-acetyl-anhydromuranmyl-L-alanine amidase1e-59229
NC_020829:1068438:108490810849081085471564Pseudomonas denitrificans ATCC 13867, complete genomeN-acetyl-anhydromuranmyl-L-alanine amidase5e-58223
NC_015410:969526:986337986337986888552Pseudomonas mendocina NK-01 chromosome, complete genomeN-acetyl-anhydromuranmyl-L-alanine amidase4e-57220
NC_009439:860571:878735878735879286552Pseudomonas mendocina ymp, complete genomeN-acetyl-anhydromuranmyl-L-alanine amidase3e-55214
NC_018868:3943088:396230739623073962897591Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeN-acetyl-anhydromuranmyl-L-alanine amidase2e-52204
NC_013971:817284:821377821377821946570Erwinia amylovora ATCC 49946 chromosome, complete genomeN-acetylmuramyl l-alanine amydase5e-52203
NC_013961:2932348:294943629494362950005570Erwinia amylovora, complete genomeProtein ampD5e-52203
NC_012214:897206:902048902048902617570Erwinia pyrifoliae Ep1/96, complete genomeN-acetylmuramyl L-alanine amydase6e-52203
NC_021066:3201500:320667332066733207236564Raoultella ornithinolytica B6, complete genomeN-acetyl-anhydromuranmyl-L-alanine amidase2e-51202
NC_010694:891967:896775896775897350576Erwinia tasmaniensis, complete genomeN-acetylmuramyl L-alanine amydase1e-51202
NC_011663:4579777:458443845844384585001564Shewanella baltica OS223 chromosome, complete genomeN-acetyl-anhydromuranmyl-L-alanine amidase5e-50197
NC_009665:4675289:468353546835354684098564Shewanella baltica OS185 chromosome, complete genomeN-acetyl-anhydromuranmyl-L-alanine amidase6e-50196
NC_011901:625712:664744664744665313570Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeN-acetyl-anhydromuranmyl-L-alanine amidase6e-49193
NC_007347:3204637:322724332272433227854612Ralstonia eutropha JMP134 chromosome 1, complete sequenceN-acetylmuramoyl-L-alanine amidase, family 21e-48192
NC_010645:406794:450383450383450994612Bordetella avium 197N, complete genomeN-acetyl-anhydromuranmyl-L-alanine amidase1e-48192
NC_013959:2666321:267620226762022676738537Sideroxydans lithotrophicus ES-1 chromosome, complete genomeN-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD7e-46183
NC_002928:507749:532483532483533064582Bordetella parapertussis 12822, complete genomeN-acetylmuramoyl-L-alanine amidase1e-45182
NC_008344:554229:557692557692558237546Nitrosomonas eutropha C91, complete genomeN-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD1e-45182
NC_002929:52500:743587435874939582Bordetella pertussis Tohama I, complete genomeN-acetylmuramoyl-L-alanine amidase1e-45182
NC_017223:51180:743587435874939582Bordetella pertussis CS chromosome, complete genomeN-acetyl-anhydromuranmyl-L-alanine amidase1e-45182
NC_002927:506183:533836533836534417582Bordetella bronchiseptica RB50, complete genomeN-acetylmuramoyl-L-alanine amidase3e-45181
NC_016616:134449:135991135991136563573Dechlorosoma suillum PS chromosome, complete genomenegative regulator of beta-lactamase expression6e-45180
NC_015850:2451957:245308224530822453636555Acidithiobacillus caldus SM-1 chromosome, complete genomeN-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD3e-44177
NC_008321:458811:472477472477473016540Shewanella sp. MR-4, complete genomeN-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD3e-44177
NC_011662:1160887:118389311838931184420528Thauera sp. MZ1T, complete genomeN-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD9e-41166
NC_012779:3316877:332413933241393324909771Edwardsiella ictaluri 93-146, complete genomeN-acetylmuramoyl-L-alanine amidase AmiD8e-1580.1
NC_012779:2127542:213393121339312134815885Edwardsiella ictaluri 93-146, complete genomeN-acetylmuramoyl-L-alanine amidase AmiD7e-1477
NC_013508:3188978:321210932121093212879771Edwardsiella tarda EIB202, complete genomeprobable N-acetylmuramoyl-L-alanine amidase2e-1375.5
NC_010067:892729:912875912875913576702Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein5e-1374.3
NC_016816:2508204:251215125121512513044894Pantoea ananatis LMG 5342, complete genomeN-acetylmuramoyl-L-alanine amidase AmiD4e-1374.3
NC_013956:1994970:200984520098452010738894Pantoea ananatis LMG 20103 chromosome, complete genomeYbjR4e-1374.3
NC_014932:1232346:126256212625621263332771Bartonella clarridgeiae 73, complete genomeN-acetylmuramoyl-L-alanine amidase amiD precursor7e-1270.5
NC_013971:1927510:194581519458151946684870Erwinia amylovora ATCC 49946 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase1e-1169.3
NC_013961:1891000:190828819082881909157870Erwinia amylovora, complete genomeprobable N-acetylmuramoyl-L-alanine amidase1e-1169.3
NC_014532:1481787:150366215036621504546885Halomonas elongata DSM 2581, complete genomeN-acetylmuramoyl-L-alanine amidase domain protein3e-1065.1
NC_019907:845663:849699849699850544846Liberibacter crescens BT-1 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase4e-1064.7
NC_013517:2633574:265363326536332654463831Sebaldella termitidis ATCC 33386, complete genomeN-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD1e-0962.8
NC_002929:2589202:258920225892022590029828Bordetella pertussis Tohama I, complete genomeputative exported hydrolase1e-0859.7