Some Help

Query: NC_007912:1111093 Saccharophagus degradans 2-40, complete genome

Start: 1111093, End: 1139350, Length: 28258

Host Lineage: Saccharophagus degradans; Saccharophagus; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is a marine gamma-proteobacterium that was isolated from decaying Spartina alterniflora, a salt marsh cord grass, in the Chesapeake Bay, USA. Saccharophagus degradans 2-40 has been used to produce ethanol from plant material and may be useful for the production bioethanol. Bacterium able to degrade complex carbohydrates. Saccharophagus degradans is capable of degrading insoluble complex carbohydrates through the collective action of enzyme complexes found on its cell surfaces, utilizing the degradation products as a carbon source. This organism may be useful in bioremediation. The degradative enzymes this organism produces are typically exoenzymes that are collected and organized into large surface complexes termed cellulosomes.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007912:26975812697581271653118951Saccharophagus degradans 2-40, complete genome1e-51212BLASTN svgBLASTP svg
NC_007912:4661141*4661141468409922959Saccharophagus degradans 2-40, complete genome7e-32147BLASTN svgBLASTP svg
NC_018868:39430883943088397038227295Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome3e-28135BLASTN svgBLASTP svg
NC_009654:29402782940278295966519388Marinomonas sp. MWYL1, complete genome4e-18101BLASTN svgBLASTP svg
NC_008321:45881145881148011921309Shewanella sp. MR-4, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_014315:22669322669324800321311Nitrosococcus watsoni C-113 chromosome, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_002505:2537655*2537655256310125447Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete1e-1489.7BLASTN svgBLASTP svg
NC_015410:96952696952699007820553Pseudomonas mendocina NK-01 chromosome, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_005071:87907*8790714203654130Prochlorococcus marinus str. MIT 9313, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_007908:1328832*1328832136532136490Rhodoferax ferrireducens T118, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_018419:50950050950052986620367Secondary endosymbiont of Ctenarytaina eucalypti chromosome,1e-0869.9BLASTN svgBLASTP svg
NC_013203:1447340*1447340147021422875Atopobium parvulum DSM 20469, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015731:3274739*3274739330258727849Nitrosomonas sp. Is79A3 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_010995:31976863197686321961221927Cellvibrio japonicus Ueda107, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_010814:15516241551624162182670203Geobacter lovleyi SZ, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_008781:4178115*4178115422557447460Polaromonas naphthalenivorans CJ2, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_008027:4953432*4953432497941825987Pseudomonas entomophila L48, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_014483:47728564772856479609923244Paenibacillus polymyxa E681 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008740:29898562989856301425624401Marinobacter aquaeolei VT8, complete genome3e-0661.9BLASTN svgBLASTP svg