Pre_GI Gene

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Host: NC_007086 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007086:1936505 Xanthomonas campestris pv. campestris str. 8004, complete genome

Host Lineage: Xanthomonas campestris; Xanthomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: The original was isolated from an inflected cauliflower in Sussex, United Kingdom, in 1958. Strain 8004 is a spontaneous rifampicin resistant strain. Causes black rot disease in crucifers. These organisms are almost exclusively found associated with their plant hosts and are not found free in the soil. This species is a major cause of black rot in crucifers, a disease that results in massive tissue degeneration. It also produces an extracellular polysaccharide known as xanthan, which is harvested commercially as a food stabilizing agent for use in industry.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
19360051936508504phosphoribosylaminoimidazole carboxylase catalytic subunitQuickGO ontologyBLASTP
193650519376471143phosphoribosylaminoimidazole carboxylaseQuickGO ontologyBLASTP
19378811938459579iron superoxide dismutaseQuickGO ontologyBLASTP
19385811938901321hypothetical proteinBLASTP
19388981939638741short chain dehydrogenaseQuickGO ontologyBLASTP
19396351940234600hypothetical proteinBLASTP
194062919438863258Oar proteinQuickGO ontologyBLASTP
194403119453771347hypothetical proteinBLASTP
19454951946010516pre-pilin like leader sequenceQuickGO ontologyBLASTP
19460071946480474pre-pilin leader sequenceQuickGO ontologyBLASTP
194648419476381155hypothetical proteinBLASTP
19476411948159519PilX proteinQuickGO ontologyBLASTP
194817219519003729PilY1 proteinQuickGO ontologyBLASTP
19519751952343369type IV pilinQuickGO ontologyBLASTP
19525241953075552fimbrial biogenesis proteinQuickGO ontologyBLASTP
195321519552362022excinuclease ABC subunit BQuickGO ontologyBLASTP
19558111956053243hypothetical proteinBLASTP
195608719577601674VirD4 proteinQuickGO ontologyBLASTP
19582571958499243hypothetical proteinBLASTP
195861019596531044VirB8 proteinQuickGO ontologyBLASTP
19596501960417768VirB9 proteinQuickGO ontologyBLASTP
196041419615951182VirB10 proteinQuickGO ontologyBLASTP
196159219626501059VirB11 proteinQuickGO ontologyBLASTP
19626961963529834VirB1 proteinQuickGO ontologyBLASTP
19635921963996405VirB2 proteinQuickGO ontologyBLASTP
19639891964300312VirB3 proteinQuickGO ontologyBLASTP
196440819668612454VirB4 proteinQuickGO ontologyBLASTP
19670081967151144hypothetical proteinBLASTP
196758919689561368IS1478 transposaseQuickGO ontologyBLASTP
196922219708381617alpha-glucosidaseQuickGO ontologyBLASTP
19711601972140981IS1479 transposaseQuickGO ontologyBLASTP
197293419757622829TonB-dependent receptorQuickGO ontologyBLASTP
197602019780982079alpha-glucosidaseQuickGO ontologyBLASTP