Pre_GI: BLASTP Hits

Some Help

Query: NC_007086:1936505:1964408 Xanthomonas campestris pv. campestris str. 8004, complete genome

Start: 1964408, End: 1966861, Length: 2454

Host Lineage: Xanthomonas campestris; Xanthomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: The original was isolated from an inflected cauliflower in Sussex, United Kingdom, in 1958. Strain 8004 is a spontaneous rifampicin resistant strain. Causes black rot disease in crucifers. These organisms are almost exclusively found associated with their plant hosts and are not found free in the soil. This species is a major cause of black rot in crucifers, a disease that results in massive tissue degeneration. It also produces an extracellular polysaccharide known as xanthan, which is harvested commercially as a food stabilizing agent for use in industry.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003902:2933121:2943358294335829458112454Xanthomonas campestris pv. campestris str. ATCC 33913, completeVirB4 protein01661
NC_010688:1908012:1937139193713919395922454Xanthomonas campestris pv. campestris, complete genometype IV secretion system energizing component VirB401594
NC_003919:3060484:3079127307912730815802454Xanthomonas axonopodis pv. citri str. 306, complete genomeVirB4 protein01542
NC_013722:2150882:2156995215699521594662472Xanthomonas albilineans, complete genomeprobable type iv secretion system protein virb401412
NC_010943:3034366:3043399304339930458462448Stenotrophomonas maltophilia K279a, complete genomeputative type IV secretion conjugal transfer protein01394
NC_015947:2752450:2763456276345627659032448Burkholderia sp. JV3 chromosome, complete genometype IV secretion/conjugal transfer ATPase, VirB4 family01392
NC_011071:2733438:2745103274510327475502448Stenotrophomonas maltophilia R551-3, complete genometype IV secretion/conjugal transfer ATPase, VirB4 family01390
NC_017271:2935643:2964110296411029665512442Xanthomonas campestris pv. raphani 756C chromosome, completeVirB4 protein01377
NC_010688:1908012:1944292194429219458151524Xanthomonas campestris pv. campestris, complete genomeVirB4 protein0938
NC_009254:365812:3658123658123682802469Burkholderia vietnamiensis G4 chromosome 3, complete sequencetype IV secretion/conjugal transfer ATPase0647
NC_010515:1124298:1135251113525111377312481Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetype IV secretion/conjugal transfer ATPase, VirB4 family0644
NC_010676:2793237:2793237279323727957022466Burkholderia phytofirmans PsJN chromosome 2, complete sequencetype IV secretion/conjugal transfer ATPase, VirB4 family0644
NC_008543:127675:1494901494901519702481Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetype IV secretion/conjugal transfer ATPase, VirB4 family0642
NC_008061:2106848:2117799211779921202792481Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetype IV secretion/conjugal transfer ATPase, VirB4 family0642
NC_011001:372185:3810183810183834982481Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative type IV secretion system protein VirB40640
NC_010524:933191:9346559346559371472493Leptothrix cholodnii SP-6, complete genometype IV secretion/conjugal transfer ATPase, VirB4 family6e-158558
NC_011985:3869998:3871859387185938742462388Agrobacterium radiobacter K84 chromosome 1, complete genometype IV secretion protein AvhB45e-147522
NC_016513:2103958:2125571212557121283422772Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeATPase3e-144513
NC_015593:1587684:1602558160255816049302373Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completetype IV secretion/conjugal transfer ATPase VirB4 family1e-125451
NC_014801:1:2335823358261262769Campylobacter jejuni subsp. jejuni ICDCCJ07001 plasmid pTet,type IV secretion system protein VirB48e-124445
NC_010170:3908500:3916385391638539188292445Bordetella petrii, complete genometype IV secretion system protein VirB47e-118425
NC_013592:2968500:2998530299853030012742745Dickeya dadantii Ech586, complete genomeCagE, TrbE, VirB component of type IV transporter system, conserved region2e-116420
NC_006142:33268:4454644546469632418Rickettsia typhi str. Wilmington, complete genomeVirB4 protein precursor7e-112405
NC_017062:33268:4451344513469302418Rickettsia typhi str. B9991CWPP chromosome, complete genometype IV secretion system ATPase VirB47e-112405
NC_017066:33268:4454644546469632418Rickettsia typhi str. TH1527 chromosome, complete genometype IV secretion system ATPase VirB47e-112405
NC_017044:130000:1353941353941378112418Rickettsia parkeri str. Portsmouth chromosome, complete genometype IV secretion system ATPase VirB42e-111404
NC_000963:110500:1140231140231164402418Rickettsia prowazekii str. Madrid E, complete genomeVIRB4 PROTEIN PRECURSOR (virB4)2e-111403
NC_017050:110500:1140211140211164382418Rickettsia prowazekii str. Katsinyian chromosome, complete genometype IV secretion system ATPase VirB42e-111403
NC_017048:452000:4560924560924585092418Rickettsia prowazekii str. GvV257 chromosome, complete genometype IV secretion system ATPase VirB42e-111403
NC_017049:109000:1122221122221146392418Rickettsia prowazekii str. Chernikova chromosome, complete genometype IV secretion system ATPase VirB42e-111403
NC_017051:109000:1122251122251146422418Rickettsia prowazekii str. Dachau chromosome, complete genometype IV secretion system ATPase VirB42e-111403
NC_017056:110500:1140311140311164482418Rickettsia prowazekii str. BuV67-CWPP chromosome, complete genometype IV secretion system ATPase VirB42e-111403
NC_017057:110000:1141481141481165652418Rickettsia prowazekii str. RpGvF24 chromosome, complete genometype IV secretion system ATPase VirB42e-111403
NC_009792:859228:8810098810098837472739Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein7e-111402
NC_020181:473170:4949524949524976902739Enterobacter aerogenes EA1509E, complete genomeATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4)7e-111402
NC_009879:107890:1122791122791146962418Rickettsia canadensis str. McKiel, complete genomeType IV secretion/conjugal transfer ATPase, VirB4 family protein7e-111402
NC_016929:109500:1131401131401155572418Rickettsia canadensis str. CA410 chromosome, complete genometype IV secretion system ATPase VirB47e-111402
NC_007799:474931:4813444813444837462403Ehrlichia chaffeensis str. Arkansas, complete genometype IV secretion system protein VirB45e-111402
NC_017028:180219:1951301951301975472418Candidatus Rickettsia amblyommii str. GAT-30V chromosome, completetype IV secretion system ATPase VirB49e-111401
NC_012731:3411161:3450241345024134529792739Klebsiella pneumoniae NTUH-K2044 chromosome, complete genometype IV secretory pathway VirB3-4 component1e-110401
NC_016818:1795576:1829965182996518327122748Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completetype IV secretory pathway, VirB4 component2e-110400
NC_007354:756500:7787647787647811662403Ehrlichia canis str. Jake, complete genomeCagE, TrbE, VirB family component of typeIV transporter system2e-110400
NC_004547:1873390:1874142187414218768892748Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative conjugal transfer protein7e-110399
NC_006831:849500:8734978734978759022406Ehrlichia ruminantium str. Gardel, complete genomeVIRB4 protein precursor6e-110399
NC_006832:853500:8778888778888802932406Ehrlichia ruminantium str. Welgevonden, complete genomeVIRB4 protein precursor4e-110399
NC_005295:873500:8983268983269007282403Ehrlichia ruminantium str. Welgevonden, complete genometype IV secretion system protein VirB43e-110399
NC_016845:3448881:3469356346935634720942739Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative type IV secretory pathway VirB4 component6e-109395
NC_017047:2079368:2079368207936820821152748Rahnella aquatilis HX2 chromosome, complete genomeputative conjugal transfer protein1e-108394
NC_012912:1701231:1705041170504117077882748Dickeya zeae Ech1591, complete genomeCagE TrbE VirB component of type IV transporter system3e-108393
NC_014500:3097362:3147941314794131507212781Dickeya dadantii 3937 chromosome, complete genomeATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4)9e-108391
NC_011283:1811000:1847938184793818506852748Klebsiella pneumoniae 342 chromosome, complete genometype IV secretion/conjugal transfer ATPase3e-106386
NC_007798:758873:7709267709267733372412Neorickettsia sennetsu str. Miyayama, complete genometype IV secretion system protein VirB44e-106386
NC_009488:1871912:1877046187704618794632418Orientia tsutsugamushi str. Boryong, complete genometype IV secretion system ATPase VirB45e-105382
NC_010793:794494:7995707995708019872418Orientia tsutsugamushi str. Ikeda, complete genometype IV secretion system protein VirB41e-104381
NC_015675:6276357:6333713633371363360822370Mesorhizobium opportunistum WSM2075 chromosome, complete genometype IV secretion/conjugal transfer ATPase, VirB4 family2e-101370
NC_014923:5765660:5779042577904257814112370Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completetype IV secretion/conjugal transfer ATPase, VirB4 family2e-101370
NC_019973:5694620:5708002570800257103712370Mesorhizobium australicum WSM2073, complete genometype IV secretion/conjugal transfer ATPase, VirB4 family2e-101370
NC_011092:76993:8981789817925672751Salmonella enterica subsp. enterica serovar Schwarzengrund strTriC protein2e-95350
NC_013416:939668:9496729496729512131542Aggregatibacter actinomycetemcomitans D11S-1, complete genomeATPase3e-87323
NC_014914:127873:1317401317401341452406Taylorella equigenitalis MCE9 chromosome, complete genomeVirB4 ATPase like protein3e-74280
NC_016626:1699500:1740570174057017432332664Burkholderia sp. YI23 plasmid byi_1p, complete sequenceType IV secretion system protein VirB41e-56222
NC_006833:976010:9866539866539890072355Wolbachia endosymbiont strain TRS of Brugia malayi, completeType IV secretory pathway, VirB4 components3e-56220
NC_012026:960000:9603409603409627692430Anaplasma marginale str. Florida, complete genomeVirB4 protein1e-38162
NC_004842:950058:9562099562099586382430Anaplasma marginale str. St. Maries, complete genomeVirB4 protein1e-38162
NC_015186:2839668:2860699286069928634192721Acidiphilium multivorum AIU301, complete genomeconjugal transfer protein TrbE8e-33142
NC_011206:1293880:1291361129136112938832523Acidithiobacillus ferrooxidans ATCC 53993, complete genomeCagE TrbE VirB component of type IV transporter system1e-32142
NC_013422:1755875:1755875175587517583342460Halothiobacillus neapolitanus c2, complete genomeCagE, TrbE, VirB component of type IV transporter system, conserved region2e-31138
NC_015850:2048251:2076658207665820790212364Acidithiobacillus caldus SM-1 chromosome, complete genometype IV secretory pathway VirB4 components-like protein2e-31137
NC_008577:1489643:1495263149526314977132451Shewanella sp. ANA-3 chromosome 1, complete sequenceAAA ATPase2e-28128
NC_015381:2859000:2877033287703328794832451Burkholderia gladioli BSR3 chromosome 1, complete sequenceATPase4e-28127
NC_018691:3082000:3099974309997431024242451Alcanivorax dieselolei B5 chromosome, complete genomeATPase1e-27125
NC_011992:3752867:3752867375286737553382472Acidovorax ebreus TPSY, complete genomeCagE TrbE VirB component of type IV transporter system4e-27124
NC_014500:894136:8941368941368966042469Dickeya dadantii 3937 chromosome, complete genomeConjugative transfer protein TrbE7e-27123
NC_015410:3209954:3207528320752832099572430Pseudomonas mendocina NK-01 chromosome, complete genomeconjugal transfer ATPase TrbE1e-26122
NC_003295:2787371:2787371278737127898212451Ralstonia solanacearum GMI1000, complete genomePROBABLE CONJUGAL TRANSFER PROTEIN TRBE1e-26122
NC_010170:4800000:4880844488084448833062463Bordetella petrii, complete genomeconjugal transfer protein TrbE1e-26122
NC_012751:409333:4299644299644310671104Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeVirB4 conjugal transfer protein2e-26121
NC_015422:1643000:1663023166302316654762454Alicycliphilus denitrificans K601 chromosome, complete genomeCagE, TrbE, VirB component of type IV transporter system, conserved region2e-26121
NC_009656:3817261:3838044383804438404972454Pseudomonas aeruginosa PA7 chromosome, complete genomeconjugal transfer ATPase TrbE3e-26120
NC_014910:2930860:2930860293086029333192460Alicycliphilus denitrificans BC chromosome, complete genomecage, trbe, virb component of type iv transporter system, conserved region protein4e-26120
NC_010002:2933909:2964490296449029669612472Delftia acidovorans SPH-1, complete genomeAAA ATPase5e-26120
NC_015942:1889421:1889881188988118924332553Acidithiobacillus ferrivorans SS3 chromosome, complete genomeCagE, TrbE, VirB component of type IV transporter system1e-25119
NC_009719:1972545:1988312198831219907382427Parvibaculum lavamentivorans DS-1 chromosome, complete genomeconjugal transfer ATPase TrbE7e-25116
NC_015556:2265940:2265940226594022683692430Pseudomonas fulva 12-X chromosome, complete genomeCagE, TrbE, VirB component of type IV transporter system, conserved region1e-24115
NC_008757:77023:97607976071000722466Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completeType IV secretory pathway VirB4 components-like protein1e-24115
NC_008781:2611702:2636646263664626390902445Polaromonas naphthalenivorans CJ2, complete genomeCagE, TrbE, VirB component of type IV transporter system6e-24113
NC_014834:959986:9776529776529801172466Rhodopseudomonas palustris DX-1 chromosome, complete genomeAAA ATPase5e-24113
NC_013192:1033177:1054164105416410566472484Leptotrichia buccalis DSM 1135, complete genomeCagE TrbE VirB component of type IV transporter system5e-24113
NC_015437:697051:7258257258257282902466Selenomonas sputigena ATCC 35185 chromosome, complete genomeAAA ATPase8e-24112
NC_015385:1875671:1875671187567118782442574Treponema succinifaciens DSM 2489 chromosome, complete genomeAAA ATPase1e-23112
NC_010125:2813653:2834802283480228372342433Gluconacetobacter diazotrophicus PAl 5, complete genomeputative conjugal transfer protein; TrbE1e-23112
NC_007950:206474:2165752165752191272553Polaromonas sp. JS666 plasmid 2, complete sequenceType IV secretory pathway VirB4 components-like2e-23111
NC_009937:4392108:4411982441198244144202439Azorhizobium caulinodans ORS 571, complete genomeATPase precursor3e-23110
NC_009720:813157:8327138327138351512439Xanthobacter autotrophicus Py2, complete genomeconjugal transfer ATPase TrbE6e-23110
NC_009720:4406991:4425146442514644275842439Xanthobacter autotrophicus Py2, complete genomeconjugal transfer ATPase TrbE2e-22108
NC_005090:1033746:1054413105441310567012289Wolinella succinogenes DSM 1740, complete genomeVIRB4 HOMOLOG3e-22107
NC_009720:3317642:3338681333868133411192439Xanthobacter autotrophicus Py2, complete genomeconjugal transfer ATPase TrbE6e-22106
NC_015221:12389:1238912389149232535Nitrosomonas sp. AL212 plasmid pNAL21202, complete sequencetype IV secretion/conjugal transfer ATPase, VirB4 family8e-22106
NC_010725:3315007:3312572331257233150102439Methylobacterium populi BJ001, complete genomeAAA ATPase8e-22106
NC_016616:2699350:2726787272678727293782592Dechlorosoma suillum PS chromosome, complete genometype IV secretory pathway, VirB4 component9e-22106
NC_014834:614890:6148906148906173312442Rhodopseudomonas palustris DX-1 chromosome, complete genometype IV transporter subunit CagE/TrbE/VirB2e-21105
NC_007925:3911323:3930710393071039331512442Rhodopseudomonas palustris BisB18, complete genomeATPase2e-21105
NC_017371:1030148:1034552103455210364771926Helicobacter pylori Gambia94/24 chromosome, complete genomeDNA transfer protein4e-21103
NC_017361:930280:9679779679779704752499Helicobacter pylori SouthAfrica7 chromosome, complete genomeDNA transfer protein4e-21103
NC_010338:4148667:4148667414866741511232457Caulobacter sp. K31, complete genomeAAA ATPase9e-21102
NC_010682:1593108:1614519161451916169662448Ralstonia pickettii 12J chromosome 1, complete sequencetype IV secretory pathway VirB4 components-like protein1e-20102
NC_008686:1439328:1441768144176814442782511Paracoccus denitrificans PD1222 chromosome 1, complete sequenceAAA ATPase2e-20101
NC_010698:870312:9080599080599105572499Helicobacter pylori Shi470, complete genomeDNA transfer protein2e-20101
NC_017367:278916:2876102876102901082499Helicobacter pylori F57, complete genomeDNA transfer protein2e-20101
NC_017376:57500:9483294832973302499Helicobacter pylori SNT49 chromosome, complete genomeDNA transfer protein3e-20101
NC_009720:670853:6708536708536732822430Xanthobacter autotrophicus Py2, complete genomeconjugal transfer ATPase TrbE4e-20100
NC_013861:3341955:3359877335987733624142538Legionella longbeachae NSW150, complete genomeConjugal transfer protein trbE precursor8e-2099.8
NC_017379:1035464:1054184105418410566822499Helicobacter pylori Puno135 chromosome, complete genomeDNA transfer protein7e-2099.8
NC_015386:125499:1367791367791393552577Treponema succinifaciens DSM 2489 plasmid pTRESU01, completeCagE, TrbE, VirB component of type IV transporter system, conserved region9e-2099.4
NC_014834:3472000:3503841350384135062822442Rhodopseudomonas palustris DX-1 chromosome, complete genometype IV transporter subunit CagE/TrbE/VirB1e-1999.4
NC_011365:1135750:1136493113649311389192427Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeconjugal transfer ATPase TrbE1e-1999
NC_017358:220900:2311372311372336352499Helicobacter pylori Cuz20 chromosome, complete genomeDNA transfer protein2e-1998.6
NC_011498:1391788:1397130139713013997062577Helicobacter pylori P12, complete genomeVirB4 type IV secretion ATPase3e-1997.8
NC_014256:485969:5220375220375246132577Helicobacter pylori B8 chromosome, complete genometype IV secretion system protein VirB48e-1996.3
NC_017371:1470582:1516315151631515188912577Helicobacter pylori Gambia94/24 chromosome, complete genomeVirB4 type IV secretion ATPase1e-1895.9
NC_010125:1011430:1030697103069710331232427Gluconacetobacter diazotrophicus PAl 5, complete genomeputative conjugal transfer protein trbE1e-1895.5
NC_017372:748097:7931967931967957782583Helicobacter pylori India7 chromosome, complete genomeVirB4 type IV secretion ATPase2e-1895.1
NC_006371:1743982:1748726174872617511222397Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical TrbE protein3e-1894.4
NC_014555:1526775:1540379154037915427482370Helicobacter pylori PeCan4 chromosome, complete genomeVirB4-like protein1e-1792
NC_000921:1007519:1015042101504210164691428Helicobacter pylori J99, complete genomeDNA transfer protein3e-1790.9
NC_009668:529175:5351505351505376602511Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceconjugal transfer ATPase TrbE4e-1790.5
NC_011498:448000:4871074871074895292423Helicobacter pylori P12, complete genome7e-1790.1
NC_000915:453958:4593334593334617562424Helicobacter pylori 26695, complete genomeVirB4 homolog8e-1789.7
NC_018939:454000:4593394593394617622424Helicobacter pylori 26695 chromosome, complete genomeVirB4-like protein8e-1789.7
NC_017361:1528239:1530624153062415330472424Helicobacter pylori SouthAfrica7 chromosome, complete genomeVirB4-like protein7e-1789.7
NC_014256:448710:4557574557574579102154Helicobacter pylori B8 chromosome, complete genomeprotein virB41e-1689.4
NC_012483:3731542:3781113378111337834792367Acidobacterium capsulatum ATCC 51196, complete genometype IV secretion/conjugal transfer ATPase, VirB4 family1e-1482.4
NC_008786:4102606:4103355410335541058262472Verminephrobacter eiseniae EF01-2, complete genomeType IV secretory pathway VirB4 components-like protein7e-1169.7
NC_017366:1055319:1061646106164610626621017Helicobacter pylori F32, complete genomevirB4 type IV secretion ATPase2e-1068.6
NC_007798:652317:6831126831126853642253Neorickettsia sennetsu str. Miyayama, complete genometype IV secretion system protein VirB42e-0861.6
NC_013009:689978:7010537010537032002148Neorickettsia risticii str. Illinois, complete genometype IV secretion system protein VirB42e-0758.5