Pre_GI Gene

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Host: NC_006361 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006361:4098469 Nocardia farcinica IFM 10152, complete genome

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
409846940998391371putative proteaseQuickGO ontologyBLASTP
409985141021452295putative guanosine pentaphosphate synthetasepolyribonucleotide nucleotidyltransferaseQuickGO ontologyBLASTP
41026104102879270putative ribosomal protein S15QuickGO ontologyBLASTP
41030454103278234hypothetical protein
41032864104245960hypothetical proteinBLASTP
410426841055841317putative phage integraseQuickGO ontologyBLASTP
41056094105803195hypothetical protein
41059494106791843putative DNA-binding proteinQuickGO ontologyBLASTP
41067884107303516hypothetical proteinBLASTP
41072724107613342hypothetical proteinBLASTP
41078414108107267hypothetical protein
41081044108307204hypothetical protein
41083044108576273hypothetical protein
41086284108969342hypothetical protein
41089764109350375hypothetical protein
41093894109661273hypothetical protein
41096684110576909hypothetical protein
41105844110937354hypothetical proteinBLASTP
41110294111337309hypothetical protein
41113694111854486hypothetical protein
41118564112707852hypothetical protein
41127334113098366hypothetical protein
41131054113446342hypothetical protein
411348041145501071hypothetical proteinBLASTP
41145504115245696hypothetical protein
411525741169841728putative phage tailQuickGO ontologyBLASTP
41169814117910930putative phage tailQuickGO ontologyBLASTP
411791641233065391putative phage tailQuickGO ontologyBLASTP
41233954124012618hypothetical proteinBLASTP
41240994124488390hypothetical protein
41245454124925381hypothetical protein
41249534125219267hypothetical protein
41253164126236921hypothetical proteinBLASTP
41263174126694378hypothetical protein
41266944126993300hypothetical protein
41269744127342369hypothetical protein
41273364127758423hypothetical proteinBLASTP
41277584128000243hypothetical protein
41280674128990924hypothetical proteinBLASTP
41290054129736732hypothetical protein
41300414130328288hypothetical protein
41303254130831507hypothetical protein
41308504131743894putative transposaseQuickGO ontologyBLASTP
413175341331561404hypothetical proteinBLASTP
413315641347901635hypothetical proteinBLASTP
413484941359911143hypothetical proteinBLASTP
41359884136239252hypothetical protein
413630941376191311putative phage terminaseQuickGO ontologyBLASTP
41376164138149534putative DNA-binding proteinQuickGO ontology
41381944138376183hypothetical protein
41384904138624135hypothetical protein
41386214138905285hypothetical protein
41389074139062156hypothetical protein
41390784139356279hypothetical protein
41393404139561222hypothetical protein
41395764139815240hypothetical proteinBLASTP
41398124140054243putative glutaredoxinQuickGO ontologyBLASTP
41402184141201984hypothetical protein
41415654142413849hypothetical proteinBLASTP
4143151414322676tRNA-ProQuickGO ontology
4143224414330279tRNA-TrpQuickGO ontology
41434304143744315hypothetical protein
41442174144906690hypothetical proteinBLASTP
41449034145730828hypothetical proteinBLASTP
41457304146323594hypothetical protein
41463204146586267hypothetical protein
41465834147542960hypothetical proteinBLASTP
41475354147912378hypothetical protein