Query: NC_006361:4098469 Nocardia farcinica IFM 10152, complete genome
Start: 4098469, End: 4147912, Length: 49444
Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_006361:1547034* | 1547034 | 1576759 | 29726 | Nocardia farcinica IFM 10152, complete genome | 0 | 1963 | BLASTN svg | BLASTP svg |
| NC_014151:30488* | 30488 | 60099 | 29612 | Cellulomonas flavigena DSM 20109 chromosome, complete genome | 0 | 714 | BLASTN svg | BLASTP svg |
| NC_018750:5828000* | 5828000 | 5850277 | 22278 | Streptomyces venezuelae ATCC 10712, complete genome | 7e-89 | 337 | BLASTN svg | BLASTP svg |
| NC_015953:5444572* | 5444572 | 5472700 | 28129 | Streptomyces sp. SirexAA-E chromosome, complete genome | 2e-86 | 329 | BLASTN svg | BLASTP svg |
| NC_010816:1989868* | 1989868 | 2011735 | 21868 | Bifidobacterium longum DJO10A, complete genome | 2e-46 | 196 | BLASTN svg | BLASTP svg |
| NC_004307:1936725* | 1936725 | 1958907 | 22183 | Bifidobacterium longum NCC2705, complete genome | 2e-46 | 196 | BLASTN svg | BLASTP svg |
| NC_015067:2032271* | 2032271 | 2054099 | 21829 | Bifidobacterium longum subsp. longum JCM 1217, complete genome | 4e-44 | 188 | BLASTN svg | BLASTP svg |
| NC_015052:2071759* | 2071759 | 2093633 | 21875 | Bifidobacterium longum subsp. infantis 157F, complete genome | 4e-44 | 188 | BLASTN svg | BLASTP svg |
| NC_007434:1712000* | 1712000 | 1801225 | 89226 | Burkholderia pseudomallei 1710b chromosome I, complete sequence | 3e-17 | 99.6 | BLASTN svg | BLASTP svg |
| NC_013440:8405719 | 8405719 | 8430599 | 24881 | Haliangium ochraceum DSM 14365, complete genome | 6e-12 | 81.8 | BLASTN svg | BLASTP svg |
| NC_014391:4672105* | 4672105 | 4704599 | 32495 | Micromonospora aurantiaca ATCC 27029 chromosome, complete genome | 2e-09 | 73.8 | BLASTN svg | BLASTP svg |
| NC_013947:6585847 | 6585847 | 6626748 | 40902 | Stackebrandtia nassauensis DSM 44728 chromosome, complete genome | 9e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_008786:4040864 | 4040864 | 4064099 | 23236 | Verminephrobacter eiseniae EF01-2, complete genome | 9e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_000963:141500* | 141500 | 169049 | 27550 | Rickettsia prowazekii str. Madrid E, complete genome | 9e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_014318:5586287* | 5586287 | 5622485 | 36199 | Amycolatopsis mediterranei U32 chromosome, complete genome | 4e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_014318:6395392 | 6395392 | 6463099 | 67708 | Amycolatopsis mediterranei U32 chromosome, complete genome | 4e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_015318:1336282* | 1336282 | 1376041 | 39760 | Hippea maritima DSM 10411 chromosome, complete genome | 4e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_015424:4251369* | 4251369 | 4276273 | 24905 | Aeromonas veronii B565 chromosome, complete genome | 4e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_019673:8763773* | 8763773 | 8793677 | 29905 | Saccharothrix espanaensis DSM 44229 complete genome | 4e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_014910:3727887* | 3727887 | 3762056 | 34170 | Alicycliphilus denitrificans BC chromosome, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
| NC_005956:699206* | 699206 | 721907 | 22702 | Bartonella henselae str. Houston-1, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
| NC_009879:141000* | 141000 | 168353 | 27354 | Rickettsia canadensis str. McKiel, complete genome | 6e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_009881:166500* | 166500 | 194362 | 27863 | Rickettsia akari str. Hartford, complete genome | 6e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_009882:167350* | 167350 | 190015 | 22666 | Rickettsia rickettsii str. 'Sheila Smith', complete genome | 6e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_010263:167450* | 167450 | 190108 | 22659 | Rickettsia rickettsii str. Iowa, complete genome | 6e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_012633:169444* | 169444 | 188495 | 19052 | Rickettsia africae ESF-5, complete genome | 6e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_015866:173951* | 173951 | 192941 | 18991 | Rickettsia heilongjiangensis 054 chromosome, complete genome | 6e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_003103:164972* | 164972 | 187671 | 22700 | Rickettsia conorii str. Malish 7, complete genome | 6e-06 | 61.9 | BLASTN svg | BLASTP svg |