Pre_GI Gene

Some Help

Host: NC_004463 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_004463:1872537 Bradyrhizobium japonicum USDA 110, complete genome

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
187102618725761551putative transposaseQuickGO ontologyBLASTP
18725371873382846transposaseQuickGO ontologyBLASTP
18734461873724279hypothetical protein
18737901874368579hypothetical protein
18743771875108732putative transposaseQuickGO ontologyBLASTP
187511418766341521putative transposaseQuickGO ontologyBLASTP
187656018777171158putative transposaseQuickGO ontologyBLASTP
18785151878904390two-component response regulatorQuickGO ontologyBLASTP
18789861879669684two component regulatorQuickGO ontologyBLASTP
187966618823352670two component regulatorQuickGO ontologyBLASTP
188321418842781065RSalpha putative transposaseQuickGO ontologyBLASTP
18843541885112759putative transposaseQuickGO ontologyBLASTP
188523518865511317C4-dicarboxylate transport proteinQuickGO ontologyBLASTP
18876591888270612molybdenum transport system permease proteinQuickGO ontologyBLASTP
188891618900071092uptake hydrogenase small subunit precursor homologQuickGO ontologyBLASTP
189002118918111791uptake hydrogenase large subunit homologQuickGO ontologyBLASTP
18917741892508735HupC protein homologQuickGO ontologyBLASTP
18925431892737195HupD protein homolog hupD N-terminalQuickGO ontologyBLASTP
18927401893141402HupD protein homolog hupD C-terminalQuickGO ontologyBLASTP
18931441893434291HupF protein homologQuickGO ontologyBLASTP
18936151894010396hypothetical proteinBLASTP
18943121894863552HupH protein homologQuickGO ontologyBLASTP