Pre_GI: BLASTP Hits

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Query: NC_004463:1872537:1883214 Bradyrhizobium japonicum USDA 110, complete genome

Start: 1883214, End: 1884278, Length: 1065

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004463:2059500:2066222206622220672861065Bradyrhizobium japonicum USDA 110, complete genomeRSalpha putative transposase0732
NC_004463:1898648:1962417196241719634811065Bradyrhizobium japonicum USDA 110, complete genomeputative transposase0726
NC_004463:1898648:1904949190494919060131065Bradyrhizobium japonicum USDA 110, complete genomeRSalpha putative transposase0726
NC_017249:8137586:816001481600148160961948Bradyrhizobium japonicum USDA 6, complete genometransposase0654
NC_017249:8358438:837020483702048371151948Bradyrhizobium japonicum USDA 6, complete genometransposase0654
NC_017249:908500:920362920362921309948Bradyrhizobium japonicum USDA 6, complete genometransposase0654
NC_017249:8283701:829388982938898294836948Bradyrhizobium japonicum USDA 6, complete genometransposase0650
NC_010170:3944228:3945315394531539463821068Bordetella petrii, complete genomeputative transposase1e-94347
NC_014836:497350:5037095037095047761068Desulfurispirillum indicum S5 chromosome, complete genomeputative transposase9e-90330
NC_014836:497350:5052555052555063221068Desulfurispirillum indicum S5 chromosome, complete genomeputative transposase9e-90330
NC_015572:1:4060140601416711071Methylomonas methanica MC09 chromosome, complete genomeputative transposase6e-81301
NC_013757:3717500:3718592371859237197041113Geodermatophilus obscurus DSM 43160, complete genomeISMsm5, transposase3e-70265
NC_007517:2241104:2282539228253922835791041Geobacter metallireducens GS-15, complete genomeputative transposase2e-68259
NC_013441:5025444:5025444502544450265171074Gordonia bronchialis DSM 43247, complete genomeISRSO5-transposase protein9e-67254
NC_016111:5515462:5522640552264055237281089Streptomyces cattleya NRRL 8057, complete genometransposase9e-65247
NC_016111:4003290:4012859401285940139471089Streptomyces cattleya NRRL 8057, complete genometransposase1e-64247
NC_016111:3308310:3330282333028233313701089Streptomyces cattleya NRRL 8057, complete genometransposase1e-64247
NC_016111:3308310:3329151332915133302391089Streptomyces cattleya NRRL 8057, complete genometransposase4e-64245
NC_009142:5425763:5433158543315854342521095Saccharopolyspora erythraea NRRL 2338, complete genomeputative transposase9e-64244
NC_007964:2762000:2769198276919827702921095Nitrobacter hamburgensis X14, complete genometISRso5; ISRSO5-transposase protein1e-63243
NC_015656:1618329:1628835162883516299231089Frankia symbiont of Datisca glomerata chromosome, complete genomeputative transposase8e-63241
NC_015656:2484749:2507008250700825080961089Frankia symbiont of Datisca glomerata chromosome, complete genomeputative transposase8e-63241
NC_015656:632960:6426266426266437141089Frankia symbiont of Datisca glomerata chromosome, complete genomeputative transposase8e-63241
NC_015656:4850833:4854067485406748551551089Frankia symbiont of Datisca glomerata chromosome, complete genomeputative transposase8e-63241
NC_015656:1653450:1668188166818816692761089Frankia symbiont of Datisca glomerata chromosome, complete genomeputative transposase8e-63241
NC_010511:6067000:6132310613231061334311122Methylobacterium sp. 4-46 chromosome, complete genomeputative transposase9e-63240
NC_008269:577111:5771115771115781931083Rhodococcus sp. RHA1 plasmid pRHL1, complete sequencetransposase1e-62240
NC_012791:2386000:2403297240329724043881092Variovorax paradoxus S110 chromosome 1, complete genomeIntegrase catalytic region3e-62239
NC_009255:1890112:1908471190847119095411071Burkholderia vietnamiensis G4 chromosome 2, complete sequenceputative transposase1e-61237
NC_009921:3473854:3481826348182634829141089Frankia sp. EAN1pec, complete genomeputative transposase2e-61236
NC_009921:8648994:8662007866200786630951089Frankia sp. EAN1pec, complete genomeputative transposase2e-61236
NC_009921:3255833:3263570326357032647391170Frankia sp. EAN1pec, complete genomeputative transposase2e-61236
NC_015656:132633:1537311537311548191089Frankia symbiont of Datisca glomerata chromosome, complete genomeputative transposase3e-61235
NC_015656:105840:1098501098501109381089Frankia symbiont of Datisca glomerata chromosome, complete genomeputative transposase3e-61235
NC_009953:3509229:3531373353137335324611089Salinispora arenicola CNS-205 chromosome, complete genomeputative transposase8e-60231
NC_015724:129331:1308041308041319071104Cupriavidus necator N-1 plasmid BB2p, complete sequencetransposase1e-59230
NC_007951:1042291:1047582104758210486521071Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative transposase1e-59230
NC_008554:4586543:4604255460425546053431089Syntrophobacter fumaroxidans MPOB, complete genomeputative transposase9e-59227
NC_008782:2781229:2781490278149027825691080Acidovorax sp. JS42, complete genomeIntegrase, catalytic region9e-59227
NC_010087:376918:4319304319304330151086Burkholderia multivorans ATCC 17616 chromosome 3, completetransposase1e-57223
NC_010801:550270:5557985557985568831086Burkholderia multivorans ATCC 17616 chromosome 3, completeISBmu8 transposase1e-57223
NC_010801:481601:4918434918434929281086Burkholderia multivorans ATCC 17616 chromosome 3, completeISBmu8 transposase1e-57223
NC_013929:6663889:6664724666472466658151092Streptomyces scabiei 87.22 chromosome, complete genometransposase4e-57222
NC_010623:72500:1035361035361046271092Burkholderia phymatum STM815 chromosome 2, complete sequenceISRSO5-transposase protein4e-57222
NC_009921:3384116:3392563339256333936541092Frankia sp. EAN1pec, complete genomeIntegrase catalytic region4e-57222
NC_009921:8648994:8660847866084786619381092Frankia sp. EAN1pec, complete genomeIntegrase catalytic region3e-57222
NC_009921:2605721:2613266261326626143571092Frankia sp. EAN1pec, complete genomeIntegrase catalytic region3e-57222
NC_009921:3473854:3480622348062234817131092Frankia sp. EAN1pec, complete genomeIntegrase catalytic region2e-57222
NC_013929:3953046:3960222396022239612831062Streptomyces scabiei 87.22 chromosome, complete genometransposase6e-57221
NC_015422:3513689:3547993354799335491201128Alicycliphilus denitrificans K601 chromosome, complete genomeISRSO5-transposase protein1e-56220
NC_008786:2850736:2851717285171728527781062Verminephrobacter eiseniae EF01-2, complete genomeIntegrase, catalytic region2e-56219
NC_011982:130199:1454811454811465811101Agrobacterium vitis S4 plasmid pTiS4, complete sequencetransposase2e-56219
NC_008786:2809985:2814159281415928151901032Verminephrobacter eiseniae EF01-2, complete genomeIntegrase, catalytic region9e-56217
NC_009921:4035225:4053138405313840542321095Frankia sp. EAN1pec, complete genomeputative transposase2e-55216
NC_010625:229478:2434062434062444761071Burkholderia phymatum STM815 plasmid pBPHY01, complete sequenceintegrase, catalytic region1e-54213
NC_009620:1307932:1307932130793213090201089Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequenceferuloyl esterase9e-54211
NC_017904:2379387:238034723803472381252906Mycobacterium sp. MOTT36Y chromosome, complete genomeISMsm2, transposase2e-53210
NC_009342:135500:1679201679201690111092Corynebacterium glutamicum R chromosome, complete genomehypothetical protein3e-53209
NC_005773:4899252:4934372493437249354451074Pseudomonas syringae pv. phaseolicola 1448A, complete genomeISPsy25, transposase4e-53209
NC_015572:4063150:4084032408403240850991068Methylomonas methanica MC09 chromosome, complete genomeintegrase catalytic subunit1e-52207
NC_004463:18497:2197221972230811110Bradyrhizobium japonicum USDA 110, complete genomeputative transposase5e-52205
NC_008554:956003:9638469638469648861041Syntrophobacter fumaroxidans MPOB, complete genomeferuloyl esterase8e-52204
NC_014355:2775979:2791725279172527927771053Candidatus Nitrospira defluvii, complete genomeputative transposase9e-51201
NC_011982:130199:1402221402221413211100Agrobacterium vitis S4 plasmid pTiS4, complete sequence1e-50200
NC_009255:1890112:189511218951121896026915Burkholderia vietnamiensis G4 chromosome 2, complete sequenceputative transposase2e-50200
NC_003295:112778:1279031279031289941092Ralstonia solanacearum GMI1000, complete genomeISRSO5-TRANSPOSASE PROTEIN8e-50197
NC_003296:262118:2697812697812708721092Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completeISRSO5-TRANSPOSASE PROTEIN2e-49196
NC_003295:112778:1179921179921190831092Ralstonia solanacearum GMI1000, complete genomeISRSO5-TRANSPOSASE PROTEIN2e-49196
NC_015422:2858228:2899937289993729010671131Alicycliphilus denitrificans K601 chromosome, complete genomeputative transposase2e-48192
NC_015422:4508028:4508028450802845091581131Alicycliphilus denitrificans K601 chromosome, complete genomeputative transposase2e-48192
NC_017249:18493:221332213323077945Bradyrhizobium japonicum USDA 6, complete genometransposase5e-48191
NC_016906:408720:430799430799431692894Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative transposase6e-48191
NC_021177:7815791:782802778280277828764738Streptomyces fulvissimus DSM 40593, complete genomePutative transposase2e-45183
NC_008786:1553833:1563177156317715642321056Verminephrobacter eiseniae EF01-2, complete genomeputative transposase2e-45182
NC_013595:5221330:522965252296525230521870Streptosporangium roseum DSM 43021, complete genome7e-41168
NC_011892:77975:9320393203942731071Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completeputative transposase8e-41167
NC_011982:130199:135413135413136204792Agrobacterium vitis S4 plasmid pTiS4, complete sequence2e-38160
NC_008786:2850736:285317828531782854035858Verminephrobacter eiseniae EF01-2, complete genomeputative transposase2e-37157
NC_009921:3384116:3401958340195834031331176Frankia sp. EAN1pec, complete genomeputative transposase5e-37155
NC_007777:2186000:2207079220707922082091131Frankia sp. CcI3, complete genomeputative IS630 family transposase8e-34144
NC_009921:5681677:569703456970345697882849Frankia sp. EAN1pec, complete genomeputative transposase3e-33142
NC_014098:2225174:2233762223376222349071146Bacillus tusciae DSM 2912 chromosome, complete genomehypothetical protein1e-31137
NC_008786:2809985:281787428178742818458585Verminephrobacter eiseniae EF01-2, complete genomeputative transposase1e-30134
NC_003296:556836:562296562296562835540Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completeREMNANT OF ISRSO5-TRANSPOSASE PROTEIN2e-30133
NC_015312:5240653:5245208524520852463111104Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeIntegrase catalytic region4e-30132
NC_008554:956003:972935972935973336402Syntrophobacter fumaroxidans MPOB, complete genomeputative transposase5e-30132
NC_019673:8161242:8181272818127281823301059Saccharothrix espanaensis DSM 44229 complete genomeTransposase, IS630 family1e-28127
NC_009921:4035225:404906740490674049702636Frankia sp. EAN1pec, complete genomeputative transposase2e-28126
NC_013216:1442044:1468312146831214694451134Desulfotomaculum acetoxidans DSM 771, complete genomehypothetical protein2e-26120
NC_013216:4097056:4099180409918041003131134Desulfotomaculum acetoxidans DSM 771, complete genomehypothetical protein2e-26120
NC_016906:1458158:146980714698071470394588Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative transposase2e-26119
NC_007489:42500:495504955050038489Rhodobacter sphaeroides 2.4.1 plasmid C, complete sequence3e-26119
NC_006361:3047788:305867530586753059424750Nocardia farcinica IFM 10152, complete genomeputative transposase4e-26119
NC_016027:1851737:188045018804501880983534Gluconacetobacter xylinus NBRC 3288, complete genometransposase1e-25117
NC_009485:1487485:1495408149540814965801173Bradyrhizobium sp. BTAi1 chromosome, complete genometransposase2e-24113
NC_013194:1631134:1649249164924916503881140Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completehypothetical protein3e-23109
NC_015656:1947810:195399819539981954762765Frankia symbiont of Datisca glomerata chromosome, complete genomeputative transposase3e-23109
NC_010572:8493946:8525297852529785264301134Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative transposase2e-21103
NC_010572:1:1950019500206331134Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative transposase2e-21103
NC_007951:1042291:104664910466491047188540Burkholderia xenovorans LB400 chromosome 1, complete sequence8e-21101
NC_016027:54305:786597865979180522Gluconacetobacter xylinus NBRC 3288, complete genometransposase1e-20101
NC_015957:7301546:730834073083407308813474Streptomyces violaceusniger Tu 4113 chromosome, complete genome9e-2097.8
NC_015957:7408466:744860574486057449471867Streptomyces violaceusniger Tu 4113 chromosome, complete genomeputative transposase2e-1893.6
NC_010524:824145:836012836012836683672Leptothrix cholodnii SP-6, complete genometransposase6e-1892
NC_014623:3029853:305533030553303056112783Stigmatella aurantiaca DW4/3-1 chromosome, complete genometransposase8e-1891.7
NC_010172:4064087:408429440842944084764471Methylobacterium extorquens PA1, complete genomehypothetical protein7e-1788.6
NC_008554:956003:972392972392972700309Syntrophobacter fumaroxidans MPOB, complete genomehypothetical protein5e-1685.5
NC_015416:2785514:279739527973952798000606Methanosaeta concilii GP-6 chromosome, complete genometransposase7e-1582
NC_003552:1234712:123726212372621237921660Methanosarcina acetivorans C2A, complete genome2e-1480.1
NC_003155:320979:336652336652337179528Streptomyces avermitilis MA-4680, complete genomeIS630 family transposase3e-1479.7
NC_013595:8162181:8179090817909081801241035Streptosporangium roseum DSM 43021, complete genomehypothetical protein3e-1376.3
NC_008553:1038344:105185810518581052481624Methanosaeta thermophila PT, complete genometransposase3e-1376.3
NC_015635:3860570:388549938854993885855357Microlunatus phosphovorus NM-1, complete genomehypothetical protein1e-1274.7
NC_016027:54305:791977919779562366Gluconacetobacter xylinus NBRC 3288, complete genometransposase5e-1272
NC_013595:9994000:9994889999488999960101122Streptosporangium roseum DSM 43021, complete genomehypothetical protein1e-1170.9
NC_015416:1832759:183915418391541839768615Methanosaeta concilii GP-6 chromosome, complete genometransposase4e-1169.3
NC_005126:5188976:5188976518897651899891014Photorhabdus luminescens subsp. laumondii TTO1, complete genomeTransposase, IS630 family6e-1168.6
NC_008536:9538891:9573048957304895741691122Solibacter usitatus Ellin6076, complete genomehypothetical protein1e-1068.2
NC_015675:6464000:646897064689706469923954Mesorhizobium opportunistum WSM2075 chromosome, complete genome1e-1067.8
NC_009921:3473854:348477834847783485440663Frankia sp. EAN1pec, complete genomehypothetical protein2e-1067.4
NC_003296:556836:564871564871565455585Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completeREMNANT OF ISRSO5 TRANSPOSASE PROTEIN2e-1067.4
NC_003901:2906493:292085429208542921513660Methanosarcina mazei Go1, complete genometransposase1e-1067.4
NC_015635:2001539:201470720147072015051345Microlunatus phosphovorus NM-1, complete genomehypothetical protein3e-1066.6
NC_020210:1275031:1342816134281613438591044Geobacillus sp. GHH01, complete genometransposase4e-1066.2
NC_014623:6809000:681692568169256817668744Stigmatella aurantiaca DW4/3-1 chromosome, complete genometransposase4e-1065.9
NC_014254:132957:134105134105134698594Methanohalobium evestigatum Z-7303 plasmid pMETEV01, completetransposase8e-1065.1
NC_014253:142026:163556163556164149594Methanohalobium evestigatum Z-7303 chromosome, complete genometransposase8e-1065.1
NC_015656:1618329:162811016281101628718609Frankia symbiont of Datisca glomerata chromosome, complete genomehypothetical protein8e-1065.1
NC_020126:8512908:852167485216748522066393Myxococcus stipitatus DSM 14675, complete genometransposase1e-0964.7
NC_016111:3052494:3078576307857630796971122Streptomyces cattleya NRRL 8057, complete genometransposase1e-0964.3
NC_016943:3270308:331252233125223313142621Blastococcus saxobsidens DD2, complete genomeputative transposase1e-0964.3
NC_013595:3541012:3550637355063735517671131Streptosporangium roseum DSM 43021, complete genomehypothetical protein2e-0963.9
NC_007489:42500:492574925749529273Rhodobacter sphaeroides 2.4.1 plasmid C, complete sequence2e-0963.5
NC_011060:1538375:154562215456221546245624Pelodictyon phaeoclathratiforme BU-1, complete genometransposase3e-0963.2
NC_019892:9280367:928552892855289286325798Singulisphaera acidiphila DSM 18658 chromosome, complete genomehypothetical protein3e-0963.2
NC_007759:1028977:105511710551171055737621Syntrophus aciditrophicus SB, complete genometransposase and inactivated derivatives3e-0963.2
NC_003552:1234712:123682412368241237252429Methanosarcina acetivorans C2A, complete genome4e-0962.8
NC_011894:983572:100650810065081007044537Methylobacterium nodulans ORS 2060, complete genomehypothetical protein4e-0962.8
NC_009485:1604942:164366516436651644285621Bradyrhizobium sp. BTAi1 chromosome, complete genometransposase5e-0962.4
NC_005125:4062025:406516940651694065420252Gloeobacter violaceus PCC 7421, complete genomeputative transposase5e-0962.4
NC_016861:22256:3292232922339591038Salmonella enterica subsp. enterica serovar Typhimurium strputative integrase7e-0962
NC_003277:22257:3292932929339661038Salmonella typhimurium LT2 plasmid pSLT, complete sequenceputative integrase protein7e-0962
NC_011060:514874:528575528575529138564Pelodictyon phaeoclathratiforme BU-1, complete genometransposase2e-0860.8
NC_015434:2375439:239636523963652397258894Verrucosispora maris AB-18-032 chromosome, complete genomeintegrase catalytic domain-containing protein2e-0860.5
NC_013595:7302888:730714773071477307701555Streptosporangium roseum DSM 43021, complete genomehypothetical protein3e-0859.7
NC_008278:5855401:5883223588322358842301008Frankia alni ACN14a, complete genomeTransposase5e-0858.9
NC_008553:1038344:105135310513531051832480Methanosaeta thermophila PT, complete genometransposase8e-0858.5
NC_016027:1851737:188099118809911881428438Gluconacetobacter xylinus NBRC 3288, complete genometransposase1e-0757.8
NC_007385:157516:1607221607221617531032Shigella sonnei Ss046 plasmid pSS_046, complete sequenceIS630 ORF1e-0757.8
NC_007759:1028977:105574310557431056267525Syntrophus aciditrophicus SB, complete genometransposase and inactivated derivatives1e-0757.8
NC_016822:3485631:3497894349789434989251032Shigella sonnei 53G, complete genomeIS630 orf1e-0757.8
NC_003888:8594500:861249886124988613085588Streptomyces coelicolor A3(2), complete genomehypothetical protein2e-0757.4
NC_007384:2007467:2014725201472520157561032Shigella sonnei Ss046, complete genomeIS630 ORF1e-0757.4
NC_007384:1737885:1748054174805417490851032Shigella sonnei Ss046, complete genomeIS630 ORF1e-0757.4
NC_007384:307013:3185883185883196191032Shigella sonnei Ss046, complete genomeIS630 ORF1e-0757.4
NC_007384:3383983:3383983338398333850141032Shigella sonnei Ss046, complete genomeIS630 ORF1e-0757.4
NC_016822:1818897:1827376182737618284071032Shigella sonnei 53G, complete genomeIS630 orf1e-0757.4
NC_016822:3282654:3298701329870132997321032Shigella sonnei 53G, complete genomeIS630 orf1e-0757.4
NC_016906:408720:431689431689431895207Gordonia polyisoprenivorans VH2 chromosome, complete genomehypothetical protein3e-0756.6
NC_012214:745302:7522477522477532871041Erwinia pyrifoliae Ep1/96, complete genometransposase2e-0756.6
NC_012214:537000:5410455410455420851041Erwinia pyrifoliae Ep1/96, complete genometransposase2e-0756.6
NC_007951:1042291:104722510472251047428204Burkholderia xenovorans LB400 chromosome 1, complete sequence2e-0756.6
NC_010501:2796000:281703528170352817409375Pseudomonas putida W619, complete genometransposase, putative4e-0756.2
NC_012793:1718000:1732449173244917335161068Geobacillus sp. WCH70, complete genomeIntegrase catalytic region4e-0755.8
NC_008639:2968000:301191030119103012470561Chlorobium phaeobacteroides DSM 266, complete genometransposase6e-0755.5
NC_003901:2906493:292041729204172920848432Methanosarcina mazei Go1, complete genometransposase5e-0755.5
NC_020210:1275031:130365813036581304146489Geobacillus sp. GHH01, complete genometransposase2e-0653.9
NC_016593:3249767:326731032673103267798489Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehypothetical protein2e-0653.9
NC_020210:1704500:1748735174873517498021068Geobacillus sp. GHH01, complete genometransposase3e-0653.1
NC_017080:1335407:134165113416511342322672Phycisphaera mikurensis NBRC 102666, complete genomeputative transposase for insertion sequence element4e-0652.8
NC_011059:65414:785297852979089561Prosthecochloris aestuarii DSM 271, complete genometransposase5e-0652.4
NC_012691:1144715:1153221115322111542401020Tolumonas auensis DSM 9187, complete genometransposase, putative5e-0652.4
NC_012691:2050957:2054975205497520559941020Tolumonas auensis DSM 9187, complete genometransposase, putative5e-0652.4
NC_004851:191709:195760195760196716957Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceIS630 ORF6e-0652
NC_017319:192482:195688195688196644957Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceIS630 ORF7e-0652