Pre_GI: BLASTN Hits

Some Help

Query: NC_004463:1872537 Bradyrhizobium japonicum USDA 110, complete genome

Start: 1872537, End: 1894863, Length: 22327

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004463:18986481898648196425565608Bradyrhizobium japonicum USDA 110, complete genome02765BLASTN svgBLASTP svg
NC_004463:20595002059500207783918340Bradyrhizobium japonicum USDA 110, complete genome02230BLASTN svgBLASTP svg
NC_004463:55409245540924556841727494Bradyrhizobium japonicum USDA 110, complete genome01939BLASTN svgBLASTP svg
NC_004463:1992000*1992000204369751698Bradyrhizobium japonicum USDA 110, complete genome01616BLASTN svgBLASTP svg
NC_004463:17490001749000176859919600Bradyrhizobium japonicum USDA 110, complete genome01612BLASTN svgBLASTP svg
NC_002678:48857904885790493387048081Mesorhizobium loti MAFF303099, complete genome1e-88335BLASTN svgBLASTP svg
NC_002678:50606705060670511283352164Mesorhizobium loti MAFF303099, complete genome3e-55224BLASTN svgBLASTP svg
NC_015186:2197236*2197236229649299257Acidiphilium multivorum AIU301, complete genome2e-53218BLASTN svgBLASTP svg
NC_011757:11212621121262114088219621Methylobacterium chloromethanicum CM4, complete genome7e-44186BLASTN svgBLASTP svg
NC_011757:39881*398817409934219Methylobacterium chloromethanicum CM4, complete genome7e-44186BLASTN svgBLASTP svg
NC_012808:1122341*1122341115920936869Methylobacterium extorquens AM1, complete genome7e-44186BLASTN svgBLASTP svg
NC_012808:37118063711806373409922294Methylobacterium extorquens AM1, complete genome7e-44186BLASTN svgBLASTP svg
NC_012808:4137000*4137000416801731018Methylobacterium extorquens AM1, complete genome7e-44186BLASTN svgBLASTP svg
NC_012808:4235567*4235567425812622560Methylobacterium extorquens AM1, complete genome7e-44186BLASTN svgBLASTP svg
NC_012808:92198592198594462922645Methylobacterium extorquens AM1, complete genome7e-44186BLASTN svgBLASTP svg
NC_012811:11053951105395112959924205Methylobacterium extorquens AM1 megaplasmid, complete sequence7e-44186BLASTN svgBLASTP svg
NC_012811:22754122754127111643576Methylobacterium extorquens AM1 megaplasmid, complete sequence7e-44186BLASTN svgBLASTP svg
NC_002678:48591114859111488349624386Mesorhizobium loti MAFF303099, complete genome4e-42180BLASTN svgBLASTP svg
NC_008686:405159*40515944047735319Paracoccus denitrificans PD1222 chromosome 1, complete sequence2e-37165BLASTN svgBLASTP svg
NC_003047:33600003360000341859958600Sinorhizobium meliloti 1021, complete genome2e-34155BLASTN svgBLASTP svg
NC_015186:347346*34734637448527140Acidiphilium multivorum AIU301, complete genome1e-32149BLASTN svgBLASTP svg
NC_015186:1126830*1126830116450437675Acidiphilium multivorum AIU301, complete genome1e-32149BLASTN svgBLASTP svg
NC_013856:69200069200071990027901Azospirillum sp. B510 plasmid pAB510b, complete sequence1e-32149BLASTN svgBLASTP svg
NC_014006:2932959*2932959295601723059Sphingobium japonicum UT26S chromosome 1, complete genome3e-18101BLASTN svgBLASTP svg
NC_008687:25669225669228607929388Paracoccus denitrificans PD1222 chromosome 2, complete sequence1e-1799.6BLASTN svgBLASTP svg
NC_009720:2424975*2424975244520720233Xanthobacter autotrophicus Py2, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_013851:26108472610847263605825212Allochromatium vinosum DSM 180 chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_007952:32382413238241325679118551Burkholderia xenovorans LB400 chromosome 2, complete sequence5e-1797.6BLASTN svgBLASTP svg
NC_007951:76950076950079672027221Burkholderia xenovorans LB400 chromosome 1, complete sequence5e-1797.6BLASTN svgBLASTP svg
NC_007951:2206263*2206263222784621584Burkholderia xenovorans LB400 chromosome 1, complete sequence5e-1797.6BLASTN svgBLASTP svg
NC_007951:20873852087385211670629322Burkholderia xenovorans LB400 chromosome 1, complete sequence5e-1797.6BLASTN svgBLASTP svg
NC_007951:19289061928906195286323958Burkholderia xenovorans LB400 chromosome 1, complete sequence5e-1797.6BLASTN svgBLASTP svg
NC_007973:14117141411714144204530332Ralstonia metallidurans CH34 chromosome 1, complete sequence2e-1385.7BLASTN svgBLASTP svg
NC_010087:376918*37691844748870571Burkholderia multivorans ATCC 17616 chromosome 3, complete3e-1281.8BLASTN svgBLASTP svg
NC_010086:18163781816378188976873391Burkholderia multivorans ATCC 17616 chromosome 2, complete3e-1281.8BLASTN svgBLASTP svg
NC_010805:57570957570964147565767Burkholderia multivorans ATCC 17616 chromosome 2, complete3e-1281.8BLASTN svgBLASTP svg
NC_010801:48160148160150140619806Burkholderia multivorans ATCC 17616 chromosome 3, complete3e-1281.8BLASTN svgBLASTP svg
NC_010505:40095040095042537624427Methylobacterium radiotolerans JCM 2831, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014375:1146328*1146328117709930772Brevundimonas subvibrioides ATCC 15264 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010086:1907959*1907959194027532317Burkholderia multivorans ATCC 17616 chromosome 2, complete3e-0971.9BLASTN svgBLASTP svg
NC_010805:530876*53087656144030565Burkholderia multivorans ATCC 17616 chromosome 2, complete3e-0971.9BLASTN svgBLASTP svg
NC_010804:996837996837104668249846Burkholderia multivorans ATCC 17616 chromosome 1, complete3e-0971.9BLASTN svgBLASTP svg
NC_011060:1947795*1947795197153223738Pelodictyon phaeoclathratiforme BU-1, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007510:33400083340008337541735410Burkholderia sp. 383 chromosome 1, complete sequence4e-0867.9BLASTN svgBLASTP svg
NC_004463:18497184974626527769Bradyrhizobium japonicum USDA 110, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015379:42492384249238427562626389Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,2e-0765.9BLASTN svgBLASTP svg
NC_010623:18714921871492194209470603Burkholderia phymatum STM815 chromosome 2, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_010067:11161481116148113933023183Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete3e-0661.9BLASTN svgBLASTP svg
NC_008536:9538891*9538891958717848288Solibacter usitatus Ellin6076, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_006513:148950*14895017362324674Azoarcus sp. EbN1, complete genome3e-0661.9BLASTN svgBLASTP svg