Pre_GI Gene

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Host: NC_004347 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_004347:718091 Shewanella oneidensis MR-1, complete genome

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
718091719080990transcriptional regulator LysR familyQuickGO ontologyBLASTP
7190847204421359MATE efflux family proteinQuickGO ontologyBLASTP
720670720960291co-chaperonin GroESQuickGO ontologyBLASTP
7210197226561638chaperonin GroELQuickGO ontologyBLASTP
723011723304294transcriptional regulator CroCI familyQuickGO ontologyBLASTP
7233087246091302hypothetical proteinBLASTP
725102725668567hypothetical protein
7256657268761212transposase mutator familyQuickGO ontologyBLASTP
726928727845918hypothetical protein
7278277292541428hypothetical proteinBLASTP
730111730368258hypothetical protein
731442731744303monoheme cytochrome cQuickGO ontologyBLASTP
7317467329721227oxidoreductase molybdopterin-bindingQuickGO ontologyBLASTP
732972733355384monoheme cytochrome c putativeQuickGO ontology
733352733687336monoheme cytochrome cQuickGO ontologyBLASTP
733782734261480hypothetical proteinBLASTP
7344027366452244TonB-dependent receptor putativeQuickGO ontologyBLASTP
736873737382510hypothetical protein
737575737826252hypothetical proteinBLASTP
7384947407192226catalaseperoxidase HPIQuickGO ontologyBLASTP
7410237424351413ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
742568742864297hypothetical proteinBLASTP
742861743364504hypothetical proteinBLASTP
743572743751180hypothetical protein
7439547460442091hypothetical protein
7462307474441215ISSod3 transposaseQuickGO ontologyBLASTP
747682747924243hypothetical proteinBLASTP
748237748848612cold shock domain family proteinQuickGO ontologyBLASTP
749154749510357hypothetical proteinBLASTP
749512750462951hypothetical protein
750477751271795hypothetical proteinBLASTP
7515697536472079TonB-dependent receptor putativeQuickGO ontologyBLASTP
753875754522648hypothetical alkaline phosphataseQuickGO ontologyBLASTP
754522755379858BLASTP
755419756255837BLASTP
756464757399936melanin biosynthesis protein TyrA putativeQuickGO ontologyBLASTP