Pre_GI: BLASTN Hits

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Query: NC_004347:718091 Shewanella oneidensis MR-1, complete genome

Start: 718091, End: 757399, Length: 39309

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008322:641197*64119766698525789Shewanella sp. MR-7, complete genome04974BLASTN svgBLASTP svg
NC_004347:44411104441110446506923960Shewanella oneidensis MR-1, complete genome02650BLASTN svgBLASTP svg
NC_008321:29220002922000294409922100Shewanella sp. MR-4, complete genome02224BLASTN svgBLASTP svg
NC_009052:18999541899954192338923436Shewanella baltica OS155, complete genome01935BLASTN svgBLASTP svg
NC_008700:36923333692333371504922717Shewanella amazonensis SB2B, complete genome01126BLASTN svgBLASTP svg
NC_009092:52151952151954593124413Shewanella loihica PV-4, complete genome01090BLASTN svgBLASTP svg
NC_010506:51950005195000521688621887Shewanella woodyi ATCC 51908, complete genome0920BLASTN svgBLASTP svg
NC_009052:43357544335754435735621603Shewanella baltica OS155, complete genome4e-139504BLASTN svgBLASTP svg
NC_004347:79189779189781264920753Shewanella oneidensis MR-1, complete genome2e-137498BLASTN svgBLASTP svg
NC_008322:72261272261274059917988Shewanella sp. MR-7, complete genome2e-116428BLASTN svgBLASTP svg
NC_009997:68572668572671858932864Shewanella baltica OS195, complete genome3e-112414BLASTN svgBLASTP svg
NC_015663:19348631934863195458219720Enterobacter aerogenes KCTC 2190 chromosome, complete genome2e-104389BLASTN svgBLASTP svg
NC_020181:3518396*3518396354042322028Enterobacter aerogenes EA1509E, complete genome4e-102381BLASTN svgBLASTP svg
NC_008321:45881145881148011921309Shewanella sp. MR-4, complete genome6e-101377BLASTN svgBLASTP svg
NC_008322:1186000*1186000121709931100Shewanella sp. MR-7, complete genome6e-95357BLASTN svgBLASTP svg
NC_013956:45500045500047503720038Pantoea ananatis LMG 20103 chromosome, complete genome4e-71278BLASTN svgBLASTP svg
NC_013850:49933074993307502215628850Klebsiella variicola At-22 chromosome, complete genome1e-61246BLASTN svgBLASTP svg
NC_008700:2701500*2701500273890037401Shewanella amazonensis SB2B, complete genome2e-60242BLASTN svgBLASTP svg
NC_004347:4211241*4211241423643925199Shewanella oneidensis MR-1, complete genome9e-60240BLASTN svgBLASTP svg
NC_013508:34361734361737314529529Edwardsiella tarda EIB202, complete genome9e-60240BLASTN svgBLASTP svg
NC_009648:4958500*4958500498569827199Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome1e-49206BLASTN svgBLASTP svg
NC_007712:532500*53250055659924100Sodalis glossinidius str. 'morsitans', complete genome1e-40176BLASTN svgBLASTP svg
NC_004347:1038253*1038253107053732285Shewanella oneidensis MR-1, complete genome7e-39170BLASTN svgBLASTP svg
NC_012968:43553243553246033724806Methylotenera mobilis JLW8, complete genome3e-38168BLASTN svgBLASTP svg
NC_010995:20181201815088330703Cellvibrio japonicus Ueda107, complete genome7e-36161BLASTN svgBLASTP svg
NC_008322:37585003758500378050122002Shewanella sp. MR-7, complete genome3e-35159BLASTN svgBLASTP svg
NC_008321:97750097750099979522296Shewanella sp. MR-4, complete genome3e-35159BLASTN svgBLASTP svg
NC_015856:43425004342500437154729048Collimonas fungivorans Ter331 chromosome, complete genome4e-31145BLASTN svgBLASTP svg
NC_008321:32320003232000325409922100Shewanella sp. MR-4, complete genome2e-30143BLASTN svgBLASTP svg
NC_005085:43353334335333437106535733Chromobacterium violaceum ATCC 12472, complete genome6e-27131BLASTN svgBLASTP svg
NC_008577:2910383*2910383292929118909Shewanella sp. ANA-3 chromosome 1, complete sequence9e-26127BLASTN svgBLASTP svg
NC_006512:1722138*1722138174672424587Idiomarina loihiensis L2TR, complete genome4e-25125BLASTN svgBLASTP svg
NC_016002:3704006*3704006373059326588Pseudogulbenkiania sp. NH8B, complete genome2e-23119BLASTN svgBLASTP svg
NC_015222:2475792*2475792249670020909Nitrosomonas sp. AL212 chromosome, complete genome6e-21111BLASTN svgBLASTP svg
NC_008752:10259801025980106353637557Acidovorax avenae subsp. citrulli AAC00-1, complete genome9e-20107BLASTN svgBLASTP svg
NC_003902:62482862482864848923662Xanthomonas campestris pv. campestris str. ATCC 33913, complete3e-19105BLASTN svgBLASTP svg
NC_007086:62689162689165055223662Xanthomonas campestris pv. campestris str. 8004, complete genome3e-19105BLASTN svgBLASTP svg
NC_010688:60501860501862846423447Xanthomonas campestris pv. campestris, complete genome3e-19105BLASTN svgBLASTP svg
NC_005061:65861*658618718421324Candidatus Blochmannia floridanus, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_005955:1259393*1259393127892419532Bartonella quintana str. Toulouse, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_014323:50510415051041507664325603Herbaspirillum seropedicae SmR1 chromosome, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_011830:15044971504497153619331697Desulfitobacterium hafniense DCB-2, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_009140:121107*12110714459223486Salmonella enterica enterica sv Newport str. SL254, complete5e-1281.8BLASTN svgBLASTP svg
NC_013406:59544725954472597839723926Paenibacillus sp. Y412MC10 chromosome, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_019907:287339*28733930606718729Liberibacter crescens BT-1 chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_002947:41675004167500424373376234Pseudomonas putida KT2440, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_006526:19767791976779202212445346Zymomonas mobilis subsp. mobilis ZM4, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_007513:513806*51380653756623761Synechococcus sp. CC9902, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_008700:39278963927896394744119546Shewanella amazonensis SB2B, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_020156:90375490375492804124288Nonlabens dokdonensis DSW-6, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_009832:35000003500000352233422335Serratia proteamaculans 568, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_008573:19531719531724745052134Shewanella sp. ANA-3 plasmid 1, complete sequence5e-0971.9BLASTN svgBLASTP svg
NC_002179:66718266718268743020249Chlamydophila pneumoniae AR39, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_002491:15632515632517436718043Chlamydophila pneumoniae J138, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_009997:2967521*2967521298899221472Shewanella baltica OS195, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_010506:77445577445579420919755Shewanella woodyi ATCC 51908, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_015388:2143329*2143329217016326835Desulfobacca acetoxidans DSM 11109 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_018644:137755*13775517668438930Alpha proteobacterium HIMB59 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_010682:30336463033646306386630221Ralstonia pickettii 12J chromosome 1, complete sequence7e-0867.9BLASTN svgBLASTP svg
NC_010338:4481356*4481356450312821773Caulobacter sp. K31, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_005126:4824500*4824500485430329804Photorhabdus luminescens subsp. laumondii TTO1, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_013209:19253411925341195459929259Acetobacter pasteurianus IFO 3283-01, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_011992:35505663550566357056119996Acidovorax ebreus TPSY, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_011992:33759293375929341716741239Acidovorax ebreus TPSY, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_020210:1704500*1704500175948154982Geobacillus sp. GHH01, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_015500:90080790080793036629560Treponema brennaborense DSM 12168 chromosome, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_015186:53572753572755722721501Acidiphilium multivorum AIU301, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_014932:1232346*1232346130968277337Bartonella clarridgeiae 73, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_014734:1428282*1428282145110222821Paludibacter propionicigenes WB4 chromosome, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_010410:36068263606826369540988584Acinetobacter baumannii AYE, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_009831:45399524539952458002840077Shewanella sediminis HAW-EB3, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_008750:1659095*1659095168328224188Shewanella sp. W3-18-1, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_002505:2537655*2537655256310125447Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete5e-0661.9BLASTN svgBLASTP svg