Pre_GI Gene

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Host: NC_004347 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_004347:4007847 Shewanella oneidensis MR-1, complete genome

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
400784740090281182iron-sulfur cluster-binding proteinQuickGO ontologyBLASTP
40090484009827780molybdenum transport regulatory protein ModEQuickGO ontologyBLASTP
40100514010815765molybdenum ABC transporter periplasmic molybdenum-binding proteinQuickGO ontologyBLASTP
40108154011552738molybdate transport permease proteinQuickGO ontologyBLASTP
401154640126311086molybdenum ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
401311540142211107site-specific recombinase phage integrase familyQuickGO ontologyBLASTP
40142364014463228transcriptional regulator CroCI familyQuickGO ontologyBLASTP
40146294014862234hypothetical protein
401491140159571047hypothetical protein
40163774017015639disulfide bond formation proteinQuickGO ontologyBLASTP
40170274017638612thioldisulfide interchange protein DsbA familyQuickGO ontologyBLASTP
401805640198461791arylsulfate sulfotransferaseQuickGO ontologyBLASTP
40199004020655756hypothetical protein
40212194022190972transcriptional regulator LysR familyQuickGO ontologyBLASTP
40229634023502540BLASTP
402361040248121203ISSod4 transposaseQuickGO ontologyBLASTP
40250604025458399hypothetical protein
402551040267151206ISSod5 transposaseQuickGO ontologyBLASTP
40269304027202273hypothetical protein
402730040283401041ISSod13 transposaseQuickGO ontologyBLASTP
40284514028708258hypothetical protein
402876140299631203ISSod4 transposaseQuickGO ontologyBLASTP
40300584030468411hypothetical protein
40306374031569933site-specific recombinase phage integrase familyQuickGO ontologyBLASTP
403156340336052043ATPase AAA familyQuickGO ontologyBLASTP
40336284034095468hypothetical proteinBLASTP
40341774034581405hypothetical proteinBLASTP
40347124035044333hypothetical proteinBLASTP