Pre_GI: BLASTP Hits

Some Help

Query: NC_004347:4007847:4007847 Shewanella oneidensis MR-1, complete genome

Start: 4007847, End: 4009028, Length: 1182

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014500:4257145:4261996426199642631351140Dickeya dadantii 3937 chromosome, complete genomeputative Fe-S electron transport protein5e-147521
NC_012691:2614603:2618162261816226192891128Tolumonas auensis DSM 9187, complete genomeiron-sulfur cluster binding protein2e-131469
NC_014366:588347:6058226058226068711050Gamma proteobacterium HdN1, complete genome4Fe-4S ferredoxin, iron-sulfur binding protein5e-104378
NC_008576:2011959:2013615201361520147781164Magnetococcus sp. MC-1, complete genomedomain of unknown function DUF17305e-59228
NC_017045:1902582:190556819055681906506939Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,8e-57221
NC_014738:1742654:174564017456401746578939Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,hypothetical protein8e-57221
NC_015177:915366:935093935093936034942Pedobacter saltans DSM 12145 chromosome, complete genomeiron-sulfur cluster binding protein1e-56220
NC_017098:1542284:1542284154228415434081125Spirochaeta africana DSM 8902 chromosome, complete genomehypothetical protein1e-47190
NC_003228:76140:846818468185610930Bacteroides fragilis NCTC 9343, complete genomeputative iron-sulfur cluster-binding protein1e-45184
NC_006347:70607:791497914980078930Bacteroides fragilis YCH46, complete genomeputative iron-sulfur cluster-binding protein1e-45184
NC_016776:66223:747647476475693930Bacteroides fragilis 638R, complete genomeputative iron-sulfur cluster-binding protein2e-45183
NC_012121:1444633:1448080144808014492071128Staphylococcus carnosus subsp. carnosus TM300, complete genomehypothetical protein6e-43175
NC_017208:516127:5343275343275354691143Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeiron-sulfur cluster-binding protein2e-42173
NC_014171:521996:5405285405285416701143Bacillus thuringiensis BMB171 chromosome, complete genomeiron-sulfur cluster-binding protein4e-42172
NC_004663:4137501:4142526414252641435571032Bacteroides thetaiotaomicron VPI-5482, complete genomeputative iron-sulfur cluster-binding protein7e-42171
NC_011567:2327870:2329271232927123304071137Anoxybacillus flavithermus WK1, complete genomeUncharacterized Fe-S protein1e-41170
NC_014829:1526401:1529457152945715305961140Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeiron-sulfur cluster binding protein1e-39164
NC_012673:2368971:2383064238306423842121149Exiguobacterium sp. AT1b, complete genomeiron-sulfur cluster binding protein8e-39161
NC_010556:691498:7054197054197065641146Exiguobacterium sibiricum 255-15, complete genomeiron-sulfur cluster binding protein2e-38159
NC_017080:1194199:1209145120914512101911047Phycisphaera mikurensis NBRC 102666, complete genomehypothetical protein4e-38159
NC_018665:650847:6637566637566649161161Exiguobacterium antarcticum B7 chromosome, complete genomeIron-sulfur cluster binding protein2e-37157
NC_010718:517473:5213895213895226031215Natranaerobius thermophilus JW/NM-WN-LF, complete genomeprotein of unknown function DUF17307e-31135
NC_014393:1590893:163633316363331637313981Clostridium cellulovorans 743B chromosome, complete genomehypothetical protein2e-26120
NC_015578:3266855:3274122327412232751711050Treponema primitia ZAS-2 chromosome, complete genome4Fe-4S ferredoxin, iron-sulfur binding protein1e-1480.9
NC_007517:1107408:1112645111264511136791035Geobacter metallireducens GS-15, complete genome4Fe-4S ferredoxin, iron-sulfur binding protein7e-1375.5
NC_007356:1221500:1226459122645912278411383Dehalococcoides sp. CBDB1, complete genomeputative reductive dehalogenase3e-1169.7
NC_013552:1240073:1248692124869212500771386Dehalococcoides sp. VS, complete genomereductive dehalogenase1e-1067.8
NC_018867:993903:1008310100831010093381029Dehalobacter sp. CF chromosome, complete genomeIron-sulfur cluster-binding protein3e-0963.5
NC_018866:925704:9436899436899447171029Dehalobacter sp. DCA chromosome, complete genomeputative Fe-S protein3e-0963.5
NC_009455:173374:1733741733741747411368Dehalococcoides sp. BAV1 chromosome, complete genomereductive dehalogenase7e-0962