Pre_GI: BLASTP Hits

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Query: NC_004347:4007847:4009048 Shewanella oneidensis MR-1, complete genome

Start: 4009048, End: 4009827, Length: 780

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008321:3815940:381594038159403816719780Shewanella sp. MR-4, complete genometranscriptional regulator, ModE family1e-124445
NC_009648:838000:861302861302862090789Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeDNA-binding transcriptional regulator ModE3e-36151
NC_013971:1283942:130818113081811308960780Erwinia amylovora ATCC 49946 chromosome, complete genomemolybdenum-binding regulatory protein6e-34144
NC_013961:1246454:127065112706511271430780Erwinia amylovora, complete genomeTranscriptional regulator modE6e-34144
NC_017187:10320:110761107611858783Arcobacter butzleri ED-1, complete genomemolybdenum transport regulator7e-23107
NC_009850:11076:110761107611858783Arcobacter butzleri RM4018, complete genomemolybdenum-binding protein1e-22107
NC_009714:265098:283409283409284194786Campylobacter hominis ATCC BAA-381, complete genomeModE family transcriptional regulator1e-1893.2
NC_017192:20404:261132611326895783Arcobacter sp. L, complete genomemolybdenum transport regulator3e-1892
NC_009663:2184594:218882021888202189602783Sulfurovum sp. NBC37-1, complete genomemolybdenum transport regulatory protein2e-1789.7
NC_009431:40917:688256882569622798Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA03, completehypothetical protein1e-1583.6
NC_012560:3416451:341794234179423418754813Azotobacter vinelandii DJ, complete genomeMolybdenum-binding ModE protein2e-1479.3
NC_021150:3416450:341794134179413418753813Azotobacter vinelandii CA6, complete genomeMolybdenum-binding ModE protein2e-1479.3
NC_014972:210500:231230231230232039810Desulfobulbus propionicus DSM 2032 chromosome, complete genomeModE family transcriptional regulator7e-1477.8
NC_010581:2999002:300405730040573004848792Beijerinckia indica subsp. indica ATCC 9039, complete genometranscriptional regulator, ModE family4e-0962
NC_008392:542000:563106563106563531426Burkholderia cepacia AMMD chromosome 3, complete sequenceMolybdenum-pterin binding1e-0757.4
NC_010557:274945:293590293590294015426Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceTOBE domain protein5e-0755.1
NC_014366:588347:609588609588610016429Gamma proteobacterium HdN1, complete genomeMolybdenum-pterin binding protein1e-0653.9
NC_008253:2828573:283403328340332834461429Escherichia coli 536, complete genomeputative molybdenum-pterin-binding protein3e-0652.4
NC_015572:2262374:228491222849122285340429Methylomonas methanica MC09 chromosome, complete genomemolybdenum-pterin binding protein8e-0650.8