Pre_GI: BLASTP Hits

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Query: NC_021182:4882494:4897975 Clostridium pasteurianum BC1, complete genome

Start: 4897975, End: 4899396, Length: 1422

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021182:300415:3045853045853058981314Clostridium pasteurianum BC1, complete genomeRND family efflux transporter, MFP subunit2e-31137
NC_014206:2971304:299208129920812993025945Geobacillus sp. C56-T3 chromosome, complete genomebiotin/lipoyl attachment domain-containing protein8e-2098.6
NC_009437:2579161:2591889259188925938861998Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeRND family efflux transporter MFP subunit2e-1894
NC_015499:1167932:1167932116793211690381107Thermodesulfobium narugense DSM 14796 chromosome, complete genomeefflux transporter, RND family, MFP subunit1e-1274.7
NC_019970:439969:4460484460484478051758Thermoanaerobacterium thermosaccharolyticum M0795, complete genomemembrane-fusion protein1e-1068.6
NC_011769:3712497:3728452372845237297441293Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeefflux transporter, RND family, MFP subunit7e-0962.4
NC_008536:5192235:5211585521158552128711287Solibacter usitatus Ellin6076, complete genomeMultidrug resistance efflux pump-like protein2e-0860.8
NC_018870:2316499:2381159238115923823581200Thermacetogenium phaeum DSM 12270 chromosome, complete genomeRND-like efflux transporter7e-0858.9
NC_013385:1882549:1913095191309519143181224Ammonifex degensii KC4, complete genomeefflux transporter, RND family, MFP subunit2e-0757.8
NC_011027:858565:8762378762378775051269Chlorobaculum parvum NCIB 8327, complete genomeefflux transporter, RND family, MFP subunit9e-0755.5
NC_015589:1523203:1539828153982815410151188Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeRND family efflux transporter MFP subunit1e-0655.1
NC_015172:237397:249429249429250130702Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomesecretion protein HlyD family protein1e-0654.7
NC_014152:927969:927969927969928622654Thermincola sp. JR, complete genomesecretion protein HlyD family protein2e-0654.7
NC_018867:677848:693229693229694119891Dehalobacter sp. CF chromosome, complete genomeSecretion protein HlyD2e-0654.3
NC_018866:611588:628785628785629675891Dehalobacter sp. DCA chromosome, complete genomeSecretion protein HlyD2e-0654.3
NC_015172:237397:2483062483062494151110Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeefflux transporter, RND family, MFP subunit3e-0653.5
NC_011296:102650:1225931225931237531161Thermodesulfovibrio yellowstonii DSM 11347, complete genomeefflux transporter, RND family, MFP subunit8e-0652.4