Pre_GI: BLASTP Hits

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Query: NC_021150:1322000:1332810 Azotobacter vinelandii CA6, complete genome

Start: 1332810, End: 1333763, Length: 954

Host Lineage: Azotobacter vinelandii; Azotobacter; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism was first isolated from the soil in Vineland, New Jersey, although it is found worldwide. It is a large obligate aerobe that has one of the highest respiratory rates of any organism. Azotobacter vinelandii also produces a number of unusual nitrogenases which allow it to fix atmospheric nitrogen to ammonia, a compound it can then use as a nitrogen source. It protects the oxygen-sensitive nitrogenase enzymes through its high respiratory rate, which sequesters the nitrogenase complexes in an anoxic environment. This organism has a number of unusual characteristics. Under extreme environmental conditions, the cell will produce a cyst that is resistant to dessication and is surrounded by two capsular polysaccharide layers. This organism produces two industrially important polysaccharides, poly-beta-hydroxybutyrate (PHB) and alginate. PHB is a thermoplastic biopolymer, and alginate is used in the food industry. Alginate is also used by the pathogen Pseudomonas aeruginosa to infect the lungs of cystic fibrosis patients.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012560:1322000:133279813327981333751954Azotobacter vinelandii DJ, complete genomesigma factor algU negative regulatory protein MucB0646
NC_012660:1579204:161431416143141615276963Pseudomonas fluorescens SBW25 chromosome, complete genomesigma factor regulatory protein2e-94345
NC_009438:1282022:129734112973411298273933Shewanella putrefaciens CN-32 chromosome, complete genomesigma E regulatory protein MucB/RseB9e-2097.8
NC_011566:3994239:399664039966403997542903Shewanella piezotolerans WP3, complete genomeAnti-sigmaE factor RseB1e-1687.4
NC_012880:3241886:325839332583933259349957Dickeya dadantii Ech703, complete genomesigma E regulatory protein, MucB/RseB1e-1584.3
NC_017046:2756000:277715627771562778112957Salmonella enterica subsp. enterica serovar Typhimurium str. 798sigma-E factor regulatory protein RseB precursor1e-1480.9
NC_016856:2812905:283162428316242832580957Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Speriplasmic negative regulator of sigmaE1e-1480.9