Pre_GI: BLASTP Hits

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Query: NC_017270:1755552:1790388 Vibrio cholerae LMA3984-4 chromosome chromosome I, complete

Start: 1790388, End: 1790783, Length: 396

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012668:1688500:169285916928591693254396Vibrio cholerae MJ-1236 chromosome 1, complete sequencecell division inhibitor2e-72270
NC_008321:3964414:398640539864053986794390Shewanella sp. MR-4, complete genomeputative thiol-disulphide oxidoreductase DCC1e-22105
NC_015376:2010009:202616720261672026811645Burkholderia gladioli BSR3 chromosome chromosome 2, completeputative thiol-disulfide oxidoreductase DCC9e-1372.4
NC_008319:1081614:109109410910941091495402Synechococcus sp. CC9311, complete genomehypothetical protein8e-1062.4
NC_008095:3719441:374130037413003741710411Myxococcus xanthus DK 1622, complete genomehypothetical protein1e-0755.1
NC_009512:3618055:362304136230413623454414Pseudomonas putida F1, complete genomeputative thiol-disulphide oxidoreductase DCC2e-0754.3
NC_014355:139324:157825157825158238414Candidatus Nitrospira defluvii, complete genomehypothetical protein2e-0651.2