Pre_GI: BLASTN Hits

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Query: NC_016830:6499234 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 6499234, End: 6524156, Length: 24923

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009439:47342374734237475635022114Pseudomonas mendocina ymp, complete genome2e-177630BLASTN svgBLASTP svg
NC_014500:2934232*2934232295717222941Dickeya dadantii 3937 chromosome, complete genome6e-69270BLASTN svgBLASTP svg
NC_007973:2888824*2888824291938730564Ralstonia metallidurans CH34 chromosome 1, complete sequence1e-67266BLASTN svgBLASTP svg
NC_008060:34185134185136409922249Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence4e-39170BLASTN svgBLASTP svg
NC_003919:4946884*4946884497347526592Xanthomonas axonopodis pv. citri str. 306, complete genome7e-38167BLASTN svgBLASTP svg
NC_021066:21974902197490222049723008Raoultella ornithinolytica B6, complete genome7e-35157BLASTN svgBLASTP svg
NC_015379:89441*8944111781628376Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,4e-27131BLASTN svgBLASTP svg
NC_010688:1192410*1192410126259970190Xanthomonas campestris pv. campestris, complete genome4e-24121BLASTN svgBLASTP svg
NC_014121:2745097*2745097276822023124Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete4e-24121BLASTN svgBLASTP svg
NC_008702:25205002520500255173231233Azoarcus sp. BH72, complete genome2e-22115BLASTN svgBLASTP svg
NC_011071:35444503544450356909924650Stenotrophomonas maltophilia R551-3, complete genome9e-22113BLASTN svgBLASTP svg
NC_015671:19500811950081197227622196Cellvibrio gilvus ATCC 13127 chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_007086:1224867*1224867128273457868Xanthomonas campestris pv. campestris str. 8004, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_003902:3666544*3666544374180275259Xanthomonas campestris pv. campestris str. ATCC 33913, complete1e-1799.6BLASTN svgBLASTP svg
NC_007508:3835000*3835000385851223513Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_015947:35394723539472355883219361Burkholderia sp. JV3 chromosome, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_008786:1936626*1936626196111324488Verminephrobacter eiseniae EF01-2, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_003919:3812778*3812778386982357046Xanthomonas axonopodis pv. citri str. 306, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_014924:72538072538075060925230Pseudoxanthomonas suwonensis 11-1 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_008463:33940003394000341610022101Pseudomonas aeruginosa UCBPP-PA14, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_006834:16029941602994163009927106Xanthomonas oryzae pv. oryzae KACC10331, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_013521:19763311976331199753221202Sanguibacter keddieii DSM 10542, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015422:910292*91029293677826487Alicycliphilus denitrificans K601 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_014910:966761*96676199256725807Alicycliphilus denitrificans BC chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_008570:4009762*4009762403215322392Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_015572:22623742262374228718524812Methylomonas methanica MC09 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015572:4618467*4618467464627927813Methylomonas methanica MC09 chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_015379:60239266023926604728023355Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,3e-0971.9BLASTN svgBLASTP svg
NC_015740:1017000*1017000104061723618Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete5e-0867.9BLASTN svgBLASTP svg
NC_015556:18998501899850192183821989Pseudomonas fulva 12-X chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_008027:23972552397255242125624002Pseudomonas entomophila L48, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_018691:24107792410779243591125133Alcanivorax dieselolei B5 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_009074:3409849*3409849344201632168Burkholderia pseudomallei 668 chromosome I, complete sequence7e-0763.9BLASTN svgBLASTP svg
NC_008752:45891194589119461454025422Acidovorax avenae subsp. citrulli AAC00-1, complete genome7e-0763.9BLASTN svgBLASTP svg